Gene PSPTO_2647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2647 
Symbol 
ID1184299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp2940935 
End bp2941675 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content57% 
IMG OID637394016 
Producthypothetical protein 
Protein accessionNP_792455 
Protein GI28869836 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.00423714 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTCT ACGAGAACGT CGTCATCGGG AATTTTCTCT ACGGATTAGG GTTCGCCCTT 
GGCGCGCAGC TCAAATCGGG ACAGTTGCCC AGTATGGTCA ATCTGCTCCA GCAGACCCCC 
GATGACAAAA GGCTGGGTGA TGTGCTGATG GCGTTTCCGG GAACGGTCAG GCTGATCGAG 
TTCAAGACCG AAGCCAACAA ATCCATGAAA GAACAAAACC GCCACGCCTT CCTGTGCCAG 
GTTCTGTCGC AGCGACTCGA GCAATTACCC AGCCTGCCTG ACGTATCACG CAGGGTGCAT 
TGGTACATCG AAACAGCGCC TGTGCCGGAG GCTGCGCTCA AGGCCCGGAT AGAACCTTAT 
CTTGATGCAC TCGGTGAGGG TCATCGTCTG AGACCCAAGA CGCCCGAGAG GTTTCAGGAC 
TTCATACAGG AGCTGGCTCA GGGGATTTTG CAGGGCGTTA CGGCCCAGGG CAGCCAGAAC 
GAGCGAGATT ATCTGGACCT TGTCAGGCTG GCTCAAGGGC CGGAAGACAT CGGTACGGCC 
GGGCTGGTGC TCATCGCGGG CAGTGGCGGC GGGCTGCATT TCGCCGCGTT GCGCGATTTG 
ATGGAATTGA ACCTGCCGCA CGGCCAGTGG ATCGAGTACA ACAAGAATTT TGACCGGTCC 
ATCGAGCTGC AAAGGCAAAT GCCGGAACTC GAGCGTAAAG GACCTGTACA CAAGCTGAGC 
AAAAAGGGCA TGGAGCGATG A
 
Protein sequence
MKLYENVVIG NFLYGLGFAL GAQLKSGQLP SMVNLLQQTP DDKRLGDVLM AFPGTVRLIE 
FKTEANKSMK EQNRHAFLCQ VLSQRLEQLP SLPDVSRRVH WYIETAPVPE AALKARIEPY 
LDALGEGHRL RPKTPERFQD FIQELAQGIL QGVTAQGSQN ERDYLDLVRL AQGPEDIGTA 
GLVLIAGSGG GLHFAALRDL MELNLPHGQW IEYNKNFDRS IELQRQMPEL ERKGPVHKLS 
KKGMER