| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2646 |
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| Symbol | |
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| ID | 1184298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2940161 |
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| End bp | 2940871 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637394015 |
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| Product | transcriptional regulator, TetR family |
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| Protein accession | NP_792454 |
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| Protein GI | 28869835 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00299352 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAAAAAA GCGCAGGGCG GGGTCGTCCT TCCGTGTCGG TCGAGCGGAT TGTTGCCACG
GCACTTGAAG CGGTCGATGA GGTGGGTGCG CAGGCATTCA ATATGCGCAT GCTTGCCGAG
CGCCTTGGGT CCGGGACGGC GACGCTCTAT CGGCATTTCG CCAGCAAGGA CGAGATACTG
ATTTACGTGG TCGATAGCGT GCTGGGCGAA CTGCTTGCGG ATCAGCCCGA GGCGGTTGAA
CTCGTACCGC AAGGGCAGGG CAGCGAAGGA TATTCCTGGC AAAAGGCCTG CGCATCCGGG
GCCGAGCGCC TTTATGGCGT GTTGCGCAGG CATCCGGGTA TCTTGCCGTT GCTGGTGTCG
CAGATACCCA TCGGGCCTAA CGGGCTCAAG CGCCGCGAGC AGGGTATTGC GCTGTTTCTG
GCCAACGGCT TCCCTGCCGA ACTGGCTGCC CGTGCCTACA CGTCGGTCGC CCACTACGTA
CTGGGTTTTG CCATACAACA ACACTCAAGC GCCTCAAGCG AGGCTGCGGA AGGCGAGGAA
CTGGTCGAGT TTTTCGCCGC GCTTGATGCG AGCGAATACC CGGCCATTGC CACCGCCGGA
CGCCATCTGC CCGGTATTTC GGTGGAGGAG GAGTTCAGGT TCGGCTTGAA GCTGATAATC
GACGGGCTGG AACTCGCCGC GTCGGCCTGG CGAAAGGCTG ACGGGTGTTG A
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| Protein sequence | MEKSAGRGRP SVSVERIVAT ALEAVDEVGA QAFNMRMLAE RLGSGTATLY RHFASKDEIL
IYVVDSVLGE LLADQPEAVE LVPQGQGSEG YSWQKACASG AERLYGVLRR HPGILPLLVS
QIPIGPNGLK RREQGIALFL ANGFPAELAA RAYTSVAHYV LGFAIQQHSS ASSEAAEGEE
LVEFFAALDA SEYPAIATAG RHLPGISVEE EFRFGLKLII DGLELAASAW RKADGC
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