| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2595 |
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| Symbol | pchA |
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| ID | 1184247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2868541 |
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| End bp | 2869950 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637393965 |
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| Product | isochorismate synthase |
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| Protein accession | NP_792404 |
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| Protein GI | 28869785 |
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| COG category | [H] Coenzyme transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1169] Isochorismate synthase |
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| TIGRFAM ID | [TIGR00543] isochorismate synthases |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACCCGC TGCCATCATT CAGCGATCTG CAGGGATGTT TGACGGGAGG CCTGATGGAA
TGCCTGCACA GCGCGCGGGC GCAGGTCAGC ACAGCCCGGC CTCGGGTACT GGCCTCGTTC
TCCACGCCTT CACCACACGT GGAGCCGTTC GGGTTGTTCA CGGCCAATCG CGAGCAGGTC
CAACCGGCCT GTCTGTGGCA CGTTCAGGCA CAAGGGCAAT ACCGTTTAGG CCTGGGCCTG
GCCCATGAAT TCAACGCCGG GCCTGCAGAC AGTTGGCAAA CACTCGAGAA CCGCTGGCGG
GACATGGCAG CCACTGCGGT GGTTCGCGGC GACCATCGCC CGACGCTGTT CGGCGGTTTT
GCCTTCGACC GTCGGCAGCC CAGAACACGC CTGTGGCGCG ACTTTCCCGA CGCCGCGTTG
ACGTTGCCGC GCTTTGAATT TCACGAGTCC GATGGCCAGA CCCGGTTGAT CGTCAATGTG
CTGATTGACG AGCACAGCCA GTGCGCCGCA CTGGCAGAAG CGCTGGCTGG CGAATGGGCA
GAAATTCTCG CCCGGCCTTT GCCTGGCGCA CCGGCAAGCG GCGATCAGTT CGTGCGTTTG
TCGATGGCAC ACCTGTGGAA ACAGGACGTG TTTCACGCGG TAAACCGGAT CAAGCGTGGC
GGGCTGGAAA AGGTCGTCCT GGCCCGCTCG CAGAATGTCG CAGCGGCCAG CCCTCTGGAA
CAGGTCATGC AGCGCTTGAT GCACAAGCAG CCCAATGCCT ACCTGTTTGC TTTCGCGCGG
GGCAGCAGTT GCTTCATGGG TGCATCACCC GAATGCCTGT TGACCGTGCG CGGTGATCAA
TTGCACACCA TGGCCCTGGC AGGCACCGCA CCACGCGGGG CAAACTGCGC TGACGATGCG
CGTCTGGGCG AGCAATTGCT GCTGAGCGAG AAAGACAACA GCGAACACGC CATGGTGATC
GACTGCATCA GGCATGGCCT GGCTGAGCAC TGCCTGGTAC TGGACATCGC GTGCCGGCCG
CGACTGCACA AACTGCCGCA TATCCAGCAT CTGCTGACCC CCGTTAAGGG CACCCTTGCT
CCGAACGCCA GCCTGCTGGG CATCGCCCAA AGCCTGCACC CGACGCCTGC GGTGGGCGGC
CTGCCGCGTA ATGAGGCGCT GGACTACATC CGCAGCCATG AACAACTCGA CAGAGGCTGG
TACGCCGGAC CGATCGGCTG GCTTGACGAT CAGGGCAACG GCGAGCTCGC TGTCGCCCTG
CGCTCGGCAT TGCTCAATGG CCATAGGGCC ACGCTGTTCG CCGGCTGCGG GCTGGTCAGC
GGGTCGGAGC CGGAAAGCGA ATACCGGGAA AGCGACCTGA AGATGCAGAC GATGAGGGAA
GCATTGTCGG GAAGCGGCCT GTCTGGTTAG
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| Protein sequence | MNPLPSFSDL QGCLTGGLME CLHSARAQVS TARPRVLASF STPSPHVEPF GLFTANREQV
QPACLWHVQA QGQYRLGLGL AHEFNAGPAD SWQTLENRWR DMAATAVVRG DHRPTLFGGF
AFDRRQPRTR LWRDFPDAAL TLPRFEFHES DGQTRLIVNV LIDEHSQCAA LAEALAGEWA
EILARPLPGA PASGDQFVRL SMAHLWKQDV FHAVNRIKRG GLEKVVLARS QNVAAASPLE
QVMQRLMHKQ PNAYLFAFAR GSSCFMGASP ECLLTVRGDQ LHTMALAGTA PRGANCADDA
RLGEQLLLSE KDNSEHAMVI DCIRHGLAEH CLVLDIACRP RLHKLPHIQH LLTPVKGTLA
PNASLLGIAQ SLHPTPAVGG LPRNEALDYI RSHEQLDRGW YAGPIGWLDD QGNGELAVAL
RSALLNGHRA TLFAGCGLVS GSEPESEYRE SDLKMQTMRE ALSGSGLSG
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