| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2547 |
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| Symbol | |
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| ID | 1184199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2811942 |
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| End bp | 2812949 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637393918 |
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| Product | hypothetical protein |
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| Protein accession | NP_792357 |
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| Protein GI | 28869738 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0186955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAACCA CGGATGGGGC AGCAACCGCT GCTCTGAACG CGCTGTGTCA TGACATCAGG
GAATATTCGA TTTATCAGGC CATCCCGCTG ATTTTGCAAA TGCTGCGTGG GATTCACCCT
GATGCCGATG ATCAGGGGAT TCATGACTTT CTCGAACTGC GGGCCAACCC CGGCCTCGGG
TTCCCGGGCA GCGATATTGA CTGCATGGCG CTTTTTTACG AGCAGGGTCA TGTGCATGTA
CGACTGGATC TCAATGTCAT GAGCTTGACT GGATCAGGGT CCCCGTTGCC TGCTTTTTAC
GCCGAGCAAG CACTGGAAGA CCGAGACAAG CCCAATACCA CGCGAGACTT TGTCGATATT
TTCAATCACC GCTTACAAAA ACTGATGGTG CCTGTATGGC GCAAGTATCG CTATCACGCA
GCGTTTACCA CCGGCGCAAC CGATCCATTT TCCGAGCAAC TGTTCGCCCT GATCGGTTTG
CATGGGGAGC GCATTCGCGA AACTACCGAG TTGAACTGGA AGCGGTTATT GCCCTATCTC
GGGTTGTTGA GCTTGCGTGC GCATTCTGCT GCGCTGATTG AATCGGTGCT TCGTTACTAC
TTCAAGCACG CACAATTATT CATTGAGCAG TGCGTTGAGC GAACGGTTGA CATAACTCCT
CCGCAACTCA ACCGCCTCGG AAGAGCCAAT AGCCGGTTAG CGTATGACGC AGTGCTGGGC
AGCCGGGTTC CTGATCGGGG CGGCAAGTTT CGTATTCACA TAAAACAGCT CGACTGGAAG
CGTTTCCACG AGTTTCTGCC CATTGGCCCT GATTACCCGC CACTGGGTGC GCTCGTGCGG
TTCACCTTGC GCGACCCGCT GGATTACGAC GTCTGTCTTG AGCTTGTGCA TGAAGACATC
AGAGATTTGC GCATCGGCCA ATCAAACGCG TGTCGCCTCG GCTGGACCAG TTGGTTAGGG
CGCGAGCACG CCTTGGGCCT CGTGACGCTC AACAGACCGA CTCATTAA
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| Protein sequence | METTDGAATA ALNALCHDIR EYSIYQAIPL ILQMLRGIHP DADDQGIHDF LELRANPGLG
FPGSDIDCMA LFYEQGHVHV RLDLNVMSLT GSGSPLPAFY AEQALEDRDK PNTTRDFVDI
FNHRLQKLMV PVWRKYRYHA AFTTGATDPF SEQLFALIGL HGERIRETTE LNWKRLLPYL
GLLSLRAHSA ALIESVLRYY FKHAQLFIEQ CVERTVDITP PQLNRLGRAN SRLAYDAVLG
SRVPDRGGKF RIHIKQLDWK RFHEFLPIGP DYPPLGALVR FTLRDPLDYD VCLELVHEDI
RDLRIGQSNA CRLGWTSWLG REHALGLVTL NRPTH
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