Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2532 |
Symbol | |
ID | 1184184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2794541 |
End bp | 2796109 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637393905 |
Product | membrane protein, TerC family |
Protein accession | NP_792344 |
Protein GI | 28869725 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0861] Membrane protein TerC, possibly involved in tellurium resistance [COG4535] Putative Mg2+ and Co2+ transporter CorC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATGGA TCGCTGACCC CACGGCATGG CTTGGCCTGC TGACCCTCAT CGTGCTGGAG CTGGTGCTGG GTATCGACAA CCTGGTTTTC ATCGCCATCC TGGCGGACAA GCTGCCCCCT GAGCAACGTG ATAAAGCACG GGTCATCGGC CTGTCGCTGG CACTGATCAT GCGCCTCGGC TTGCTGGCGA GCATCTCCTG GATGGTCACG CTGACCGAGC CGTTGTTCGA GATTTTCGAC AAGACCTTTT CCGGACGTGA CCTGATCATG CTGTTCGGTG GTGTGTTCCT GCTGTTCAAG GCCACCATGG AATTGCACGA GCGGCTGGAA GGCCATGTCG CCCAGCGTGC CGGCAACGCA GGCTATGCAC TGTTCTGGCC GATCGTGGCG CAGATCGTCG TGCTTGACGC GGTGTTCTCG CTGGACGCCG TTATTACGGC AGTGGGCATG GTCGAGCACT TGTCGGTGAT GATGATCGCG GTGATCTTCT CCATTGGCCT GATGATGATC GCCAGCAAGC CGCTGACCAA GTTCGTCAAT AGTCGTCCGA CAGTGATCAT GCTGTGTCTG GGCTTTTTGA TGATGATCGG TTTCAGCCTG ACCGCAGAAG GCCTGGGTTT CCATATCCCC AAAGGCTATC TGTATGCGGC GATCGGCTTC TCGATTCTCA TCGAAGTGTT CAACCAGATT GCCCGCAAGC GCAACAAGAA GTCTGCCCAC GGCCACCTGC CGCGCCGCGA GCGTGCTGCC CATGCGGTGA TGCGCCTGTT GGGCGGCCGC AGGCTGGAAT CCGGTGATGT CGATGAAGAA ATCACCGACA TGCTGGAAGG CGAAAGCAAC GAACCGGTGT TCGATCGTCG TGAGCGGGTG ATGATCAGCG GCGTGCTGCA ACTGGCAGAG CGGCAGATTC GCACGGTTAT GACTCCGCGG GCCGAGATCG ACTACATCGA CCTGAACGAC GATGCCGAGA AGATCCGCCT GAAACTGATG CACTCTTCCT ACTCGCGCCT GCCGTTGATT GGTGAGCGTG GTATCGATGA GCCCTTGGGT TTCGTGCACA AGAAAGAGCT GTTCAAGGAA CTGTTGTCCG GCAATCAGCC CGACTTGAAG CTAATGTCGC GCAAGGCCAT TAACCTGCTG GAAAGCTTCA CGATCCTCAA TGCGCTGGAG CAGATGCGCA AGGAGTCCAC GCACATCGCG TTCGTGGTCA ACGAGTTCGG TGATTTCATC GGCGTATTGA GCATGACCGA CATTCTGGAG TCCATCGCCG GCCAGTTGCC TGACGCCAGC GAAGTGGAAG GCCCGGACAT CGTTGCGCAG GGCGAAGACT TCGTCGTTTC GGGTGCTCTC AACCTGAGCC TGATTCGCGA GCGAACCGGC TTCCAGGCCA AAGCCACCGA GGACTATCAG ACCCTGGCCG GGCTGGTCAT GAGCCTGCTG GACCGCTTGC CTTCAACGGG CGACAGCCTT AGCTGGCAGG GTTGGAACCT GCAGGTTGTA GGCGTGGAAG AACGTCGCGT GACACGGGTG TTGCTGCAAA AACAGCCTGC GGCAAGTGCT GGTAAGTAA
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Protein sequence | MEWIADPTAW LGLLTLIVLE LVLGIDNLVF IAILADKLPP EQRDKARVIG LSLALIMRLG LLASISWMVT LTEPLFEIFD KTFSGRDLIM LFGGVFLLFK ATMELHERLE GHVAQRAGNA GYALFWPIVA QIVVLDAVFS LDAVITAVGM VEHLSVMMIA VIFSIGLMMI ASKPLTKFVN SRPTVIMLCL GFLMMIGFSL TAEGLGFHIP KGYLYAAIGF SILIEVFNQI ARKRNKKSAH GHLPRRERAA HAVMRLLGGR RLESGDVDEE ITDMLEGESN EPVFDRRERV MISGVLQLAE RQIRTVMTPR AEIDYIDLND DAEKIRLKLM HSSYSRLPLI GERGIDEPLG FVHKKELFKE LLSGNQPDLK LMSRKAINLL ESFTILNALE QMRKESTHIA FVVNEFGDFI GVLSMTDILE SIAGQLPDAS EVEGPDIVAQ GEDFVVSGAL NLSLIRERTG FQAKATEDYQ TLAGLVMSLL DRLPSTGDSL SWQGWNLQVV GVEERRVTRV LLQKQPAASA GK
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