| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2519 |
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| Symbol | |
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| ID | 1184171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2782438 |
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| End bp | 2783622 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637393892 |
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| Product | oxidoreductase, FAD-binding protein |
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| Protein accession | NP_792331 |
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| Protein GI | 28869712 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.105812 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTCGC TGATTGAAAC CGATGTGGTT GTCATCGGCG GCGGCATTGT CGGCTCGTCG
GCAGCCCTGA GCCTCGCACT CAAAGGCCAG TGCGTTGCCC TGCTGGAGCG TGATTTCTGT
GGCTCGCACT CCAGCGGCGT CAACTACGGC GGCGTGCGCC GTCAGGGTCG GCCCCTGTCG
CAGTTGCCCC TGTCTCAACG GGCGCACCAG ATCTGGGGCG GCCTGCGTGA GTTGATCGGC
ATCGACGGTG AATACCAGCG CTCCGGCCAT CTCAAGCTGG CGCGCAGCGA ACACGACATG
AATGCCTTGC GTGCCTATGC GCAAGCCAGT CAGGGTTTTG GCCTGGACCT GCAATTGCTG
GATCGCGAGC AACTACGCGC CCGTTACCCC TGGGCGGGCG ATGTAGCCGT CGGTGCGTCG
CTGTGTGCTG ACGACGGACA CGCCAATCCG CGTCTGGTAT CGCCCGCCTT TGCCCGCGCC
GCTCGCCAGG CAGGAGCGCA AGTGTTCGAG CAAGCAGCGG TGAGCGAGGT CAGCCATGAC
GGCAGCGCTT TTATCGTCAG TACTGCCGAT GGCCTGAAGG TGCGGGCACC CTGGCTGCTC
AACTGCGCAG GTGCCTGGGC TGGCGCGCTG GCGGCGCAGT TCAACGAACC GGTGCCAATG
TATTCGGGGC ATCCAGCAAT GCTGGTCACC GAACCGCTGC CAATGTTCAT GGACGTCAGC
ACCGGGGTCG AAGGCGGCGG CATCTACGCC CGGCAAGTGG CGCGCGGCAA TTGCGTGCTC
GGCGGTGGTC AGGGCTTCGC GATTGACCCG GCACGCGCCA GACCCGGCCA GGCAGCGGTG
CTCGACATCC TGCGCAATGC CGTCGAGCTT TACCCGCCGC TGGCCGGTGC CCAGGCCATC
CGCACCTGGA GCGGCACCGA AGGCTACTTG CCGGATCGCG AACCGGTACT TGGGCCAAGC
CTGACCCAGC CCGGTCTGTT GCACGGTTTC GGTTTTGCCG GAGCAGGTTT CCAGATCGGC
CCGGCGGCAG GCGAAGCGCT GGCCGAATGG GTCTGCACGG GCGCGTCGCT GATCTCGCTT
GAGACTTTTT CGATTGGCCG GTTCCGGCAA CCACCCATTC CACTCACCGC TAATGCACCC
GTTTCGAACG TCATCCCATT GCACAGAGGA AGGTCGTCCC TATGA
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| Protein sequence | MSSLIETDVV VIGGGIVGSS AALSLALKGQ CVALLERDFC GSHSSGVNYG GVRRQGRPLS
QLPLSQRAHQ IWGGLRELIG IDGEYQRSGH LKLARSEHDM NALRAYAQAS QGFGLDLQLL
DREQLRARYP WAGDVAVGAS LCADDGHANP RLVSPAFARA ARQAGAQVFE QAAVSEVSHD
GSAFIVSTAD GLKVRAPWLL NCAGAWAGAL AAQFNEPVPM YSGHPAMLVT EPLPMFMDVS
TGVEGGGIYA RQVARGNCVL GGGQGFAIDP ARARPGQAAV LDILRNAVEL YPPLAGAQAI
RTWSGTEGYL PDREPVLGPS LTQPGLLHGF GFAGAGFQIG PAAGEALAEW VCTGASLISL
ETFSIGRFRQ PPIPLTANAP VSNVIPLHRG RSSL
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