| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2490 |
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| Symbol | |
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| ID | 1184142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2752511 |
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| End bp | 2754322 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637393863 |
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| Product | ABC transporter, ATP-binding/permease protein |
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| Protein accession | NP_792302 |
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| Protein GI | 28869683 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGTTT TAAAACGCTT CACGATTTTT CTGCAGCAGG CCTTGCGGGC CATGCATCTG
GTCTGGACCA CTTCCCGTGC GCTGTCCGTC GGCCTGATCC TCGCCACGCT GGTTGCAGGC
TTGTTGCCTG CGCTGGCCGC CTGGCTGGGG CAGCGTATCG TCGATGCCGT GGTCAGCGCC
ATGCAATTGC ACGCCAGCAC GGGTGACGCG CCGTTATGGC CGGTGTTGCG CTATGTGTTA
CTGGAGGCGG GCGTGCTGGC GCTGCTGGCC GGTGCGCAAC GCGGGCTGTC GGTACAGCAG
GCGCTGTTGC GGGTGCTGCT GGGGCAGAAG GTCAATACGT TGATTCTGGA GAAAGCCCAG
ACCCTGTCAC TGTCCCAGTT CGAGGATTCG GAGTTCTACG ACAAACTCGT GCGTGTCCGG
CGTGAAGCCT CGACCCGGCC GCTGGCGCTG GTGACCAAGT CGCTGGGCCT GTTGCAAAAC
CTTATTTCCC TGATCAGTTT CGCCGTGCTG CTGGTGCATT TTTCGCCCTG GGCGTTGTTG
ATTCTGGTGG TGGGTGCGCT GCCGGTCTTC TTTGCTGAGG CGCATTTTTC CGGCGATGCA
TTTCGGCTGT TTACCCGCCG TGCACCCGAA ACCCGTCGGC AGAATTACAT CGAAACACTG
CTTTCCCACG AAGGCTATAT CAAGGAGGTC AAGCTGTTCG GCTTCGCGCC GCTGCTGCTC
AAGCGCTATC GCGACACCTT TGAACGGCTG TACGCCGAAG ACCGCCGTTT GACCGTGCGC
CGTGACGGCT GGGGCTTTCT GCTCGGCTTG CTGGGCACTG CCTCGTTCTA TCTGGCGTAT
GCCTGGGTGG TGGTCGATGC CGTGCACGGG CGGATCACGC TGGGTCAGAT GACCATGTAC
CTGGTGCTCT TCAAACAGGG GCAAGCCGCG GTCAGCAGTA GCCTCAGCGC AATCAGCGGC
CTGTACGAAG ACGGGCTGTA CCTGGCTGAT TTGTACATCT ACCTCGGCCA GCCGGTCACC
CCGCCAACAG GCAGCCTCAC GCAGGGCGTG CTGCCCGGTG ACGGCATGCG TTTCGAAAAT
GTGAGCTTCA CCTACCCAGG CACCCGCCGT GCGGCACTGG AAAACATCGA CCTGCACCTG
GCACCGGGTC GCAGCGTGGC GCTGGTGGGC GAAAACGGTT CGGGCAAAAC CACGCTGATC
AAACTGCTGA CGCGGCTGTA TCAACCCGAT CAGGGCCGCA TTCTGCTGGA TGGCAGCGAC
CTGCAGGAAT GGCACGAAGA CGCGCTGCGT TCGCGCATTG GGGTGATCTT CCAGGACTTC
ATCCGCTATC AGTTTCTGGT CGGCGAGAAC CTCGGTGTCG GCGATACCCA GGCGTTTCAC
GATGAAACCC GCTGGCGCGA AGCCGCAGCG CAAGGCATGG CCGCGCAGTT CATCGAGCAG
CTCGATAAGG GCTACGCCAC CCAACTGGGC CGCTGGTTCG CGGGCGGTCA GGAGCTGTCC
GGCGGGCAGT GGCAGAAAAT CGCCCTGTCG CGCGCCTACA TGCGTCGCGA CGCCGATATC
CTGATTCTCG ATGAGCCCAC TGCGGCGCTG GATGCTGGCG CAGAAGCCGC AGTGTTCGAG
CATTTTCGTG AATACGCCAG GGGCCGCATG ACGCTGCTGA TTTCCCATCG TTTTTCCAGC
GTGCGCAACG CCGAGCACAT CGTGGTGCTG GAACACGGTC GGGTGCTGGA ACGCGGTGAC
CATGACAGCC TGATCGCCGC CGCAGGGCGC TACGCCGCGC TGTTTGATCT TCAGGCACAG
GGTTATCGTT AG
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| Protein sequence | MPVLKRFTIF LQQALRAMHL VWTTSRALSV GLILATLVAG LLPALAAWLG QRIVDAVVSA
MQLHASTGDA PLWPVLRYVL LEAGVLALLA GAQRGLSVQQ ALLRVLLGQK VNTLILEKAQ
TLSLSQFEDS EFYDKLVRVR REASTRPLAL VTKSLGLLQN LISLISFAVL LVHFSPWALL
ILVVGALPVF FAEAHFSGDA FRLFTRRAPE TRRQNYIETL LSHEGYIKEV KLFGFAPLLL
KRYRDTFERL YAEDRRLTVR RDGWGFLLGL LGTASFYLAY AWVVVDAVHG RITLGQMTMY
LVLFKQGQAA VSSSLSAISG LYEDGLYLAD LYIYLGQPVT PPTGSLTQGV LPGDGMRFEN
VSFTYPGTRR AALENIDLHL APGRSVALVG ENGSGKTTLI KLLTRLYQPD QGRILLDGSD
LQEWHEDALR SRIGVIFQDF IRYQFLVGEN LGVGDTQAFH DETRWREAAA QGMAAQFIEQ
LDKGYATQLG RWFAGGQELS GGQWQKIALS RAYMRRDADI LILDEPTAAL DAGAEAAVFE
HFREYARGRM TLLISHRFSS VRNAEHIVVL EHGRVLERGD HDSLIAAAGR YAALFDLQAQ
GYR
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