Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2487 |
Symbol | |
ID | 1184139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2749395 |
End bp | 2750210 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637393860 |
Product | class II aldolase/adducin domain protein |
Protein accession | NP_792299 |
Protein GI | 28869680 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0255579 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCAACG TCAGCGCTTT GCCGATCCAG CCAGAGACCA CGCCGTCAGG TGGCGGCAGT GTGCGCGACC GGGTGTCGCC ACAGGAATGG GAGGTCCGGG TCAAGCTGGC GGCGGCGTAT CGTCTGGCGG CGCTCAAGCG CTGGACCGAT CACATCTACA CGCATTTCTC GGCGCGGGTG CCGGGGCCGG ACGAGCACTT TCTGATCAAC GCCTTCGGCC TGCTGTTCGA TGAAATCACA GCGTCCAATC TGGTCAAGGT CGATATCGAC GGCACGATTG TCGATGACCC GACCGGATTG GGCATCAACT ACGCCGGTTA CGTGATCCAC AGCGCCATTC ACGCGGCACG TCATGACCTG CAAGCGGTGT TGCACACTCA CACCCGTGAC GGTATTGCGG TGTCGGCGCA GAAAGGCGGG CTGCTGCCGA TTTCCCAGCA CTCGATTGCC TTCTCCGGGC GCGTGGCCTA TCACGGCTAC GAAGGCATTG CGCTGGACTT GAGCGAGCGC GAACGACTGG TCGCCGATCT GGGTGACAAG AGCGTGATGA TCCTGCGTAA CCACGGGTTA CTGACCGGTG GCGTGAGCGT CGAACATGCC TTTCAGCAGC TTCATGCTCT GGAGTACGCC TGCAACATTC AGATCGCCGC GCAGTCGGCG GGTAATGACG AACTGGTGTT CCCTCCGCAG GAAGTCATCG CCAGGGTTGA AGAGCAGGCC AAGGTCATCA AGGACGGGCA TGGGCCGGGG GTTGCGCGGC ACTGGAATGC ATTGATTCGC GAGCTGGAGC GCAGCGGCAC CGATTACAGG GAGTGA
|
Protein sequence | MSNVSALPIQ PETTPSGGGS VRDRVSPQEW EVRVKLAAAY RLAALKRWTD HIYTHFSARV PGPDEHFLIN AFGLLFDEIT ASNLVKVDID GTIVDDPTGL GINYAGYVIH SAIHAARHDL QAVLHTHTRD GIAVSAQKGG LLPISQHSIA FSGRVAYHGY EGIALDLSER ERLVADLGDK SVMILRNHGL LTGGVSVEHA FQQLHALEYA CNIQIAAQSA GNDELVFPPQ EVIARVEEQA KVIKDGHGPG VARHWNALIR ELERSGTDYR E
|
| |