| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2484 |
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| Symbol | |
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| ID | 1184136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2743976 |
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| End bp | 2746378 |
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| Gene Length | 2403 bp |
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| Protein Length | 800 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637393857 |
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| Product | TonB-dependent siderophore receptor, putative |
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| Protein accession | NP_792296 |
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| Protein GI | 28869677 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.104897 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGAACT TCAAACGCAA CGTGCTGGCC ACGGCGATTT TTTCAGCCAA TTTGCTGAGT
GTCGCCGGTA TCAGCGCAAA CGCTTACGCC GCAGAAACAA CAGATGAACA AAACAATCAG
GGCGCGTCCA CGCTGGGCAC GGTAATTGTC ACCGGCACCC GCGCGCAGGA GCGTACCGCC
AGTGCGTCGC TGTCGCCCAT CGACGTGATC TCCGGTGATA GCCTGCGCAG TTCCGGCTCC
AGCGAACTGG GCACCGTGCT GGCGCGCTTG ATTCCGTCGA TCAACTTTCC GAGGCCAAGC
CTGGTGGACG GTGCGGAGCT GACCCGTCCG GCGCAACTTC GCGGCCTGTC GCCGGATCAA
GTGCTGGTGC TGGTCAACGG CAAGCGCCGC CACACGTCGG CCTTCGTCAA CCTGGGTGGC
GCGGTCGGAC GCGGCTCGGC ACCTGCCGAT CTCAACGCTA TTCCGCTGTC GGCCATCGAC
CACATCGAAG TACTGCGCGA CGGTGCTTCG GCGCGCTACG GGTCGGATGC GATTGCCGGG
GTGATCAACA TCATCCTCAA GAGCGCTGAT CACGGCGGTT CGATTTCAAG TAAATACGGC
CAGTACAAGA AGGGCGACGG TATCCAGCGT CAGGTCTCCG GCAATACCGG TTTTGCGCTG
GGCGACAACG GTACGCTGAA CCTCTCGGGT GAAGGCGCCA ACAACGACTA CACCAACCGC
GCGGGCGATG ATTTGCGCGC ATCGAGCATC GGCTCTACCA CGTATGGTCA GCAGGTATTC
CGTCAGGGCG AGCCGGAAAC CCACGAAGGC AAACTGCAGT ACAACGCCGA ATACAGCTTC
AACGATGCGG CGGAATTCTA CAGCTTCGGG GGCTACAGCA AGCGCCGCGG CGAAACGGCT
GCGTTCTATC GACCGAGCAA TGCCTCGAAC AACATTGCGG CGATTTATCC AAACGGTTAT
TTGCCGCTGA TTCACGGCAC GCTGGAAGAC ACCACATTTG TCACCGGCTT GCGCGGTGAG
CTGGCGGATG ACTGGCATTA CGACCTGTCT GCCAACTATG GCAAAAACTC TTATGAGCTG
CGCACCAAAA CCATCAACAC GTCACTGGGC CTGAACACGC CGCGCTCGTT CGATAACGGC
ACGCTGACCA ACGACCAGAA ACAGCTAAGC CTGGACCTGT CGCGGGAGTT CAACGCAACG
TGGCTGCCTT ACCCGGTGTC GGTCGCCTTT GGTGCGGAAT ACCTGCGTCA GGGTTATCAG
ATCGAGGCGG GGCAGGCGGA GTCGTATTTC CAGACCGGCA GTTCCGGGCT GGGCGGCTTT
CGCGCTGCCG ATGCGGGCAG TTACTCGCGA CACAACTTCG CCCAGTATCT GGACGTTGAG
ACCAACCTGA CCGAAAAACT GGGTGTGTCG GCCGCCGTTC GCCATGAGGA CTACAGCGAT
TTCGGCTCCA ACGTCAGTGG CTCGCTCTCG GCCCGCTACG ATTTCACCCC GCAGGTGGCC
CTGCGTGGCA GCGTATCGAC GGGCTTCCGT GCGCCATCGC TGGCCCAGCA GAACTTCACG
TTTACCTCGT CACAGTTGAT CGGCAGCACC ATTCAGGAAG CGGGTACGTT CCCGGCCGGC
AGCAACGTTG CGCAGTTGTT GGGCGCAGAA GACCTGAAAC CCGAAAAGTC GCGCAACTAC
AGCCTGGGCC TGGTACTGCA ACCGCTGGAT AGCCTGACCG TGACGGCCGA CGTCTACCGC
ATCGACATTC AGGACCGCAT CTCGCTGTCG TCCAACCTGG TGCTCAACAA CACCGCGATC
AACTACCTGC GCGCCAATGG CGTGGGCGAT ATCAACTACA CCAGCGCGCG TTACTTCACC
AACGCCACCG ACACCAGCAC CGACGGCGTG GATCTGGTGG CCAATTATCG CTACCAGTTC
GACAACGGCG TGCGCTGGAA CAGCACGGTG GGCTACAACT ACAACCACAC CAAAGTCACG
GATGTGAAAG ACAACCCGGC GATCCTCAAT CAGTTGGGCG TGAACCTGGT TCGGGTGGAC
CGCAGGGAAC GCATCGGTCT GCTCGGCGAC ACCACACCTC AGCATAAACT GACGCTGGGT
AACGACCTCA CGTTCGGCAA CTGGGCGCTG CACTCCAATC TGGTGCGCTA CGGCGAGTTC
ACCAGCTACC AGGCCGACAA AGTCAACGAC CAGACCTTCA GCGCTGCCTG GTTGCTGGAC
CTCGCTGCCG ACTACAAACT CAAGAACTGG GTCTTCACAC TGGGCGGCGA CAACGTCACC
GACAAGTACC CCGAGAAACT CAACGACTTC TCGTCAAGCG GCGGCAACCT TGCCTACAGC
ACCTTCTCGC CTTACGGTTA TAGCGGGGCG TTTTACTACG GGAAGGTGAC GTATAACTGG
TAA
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| Protein sequence | MGNFKRNVLA TAIFSANLLS VAGISANAYA AETTDEQNNQ GASTLGTVIV TGTRAQERTA
SASLSPIDVI SGDSLRSSGS SELGTVLARL IPSINFPRPS LVDGAELTRP AQLRGLSPDQ
VLVLVNGKRR HTSAFVNLGG AVGRGSAPAD LNAIPLSAID HIEVLRDGAS ARYGSDAIAG
VINIILKSAD HGGSISSKYG QYKKGDGIQR QVSGNTGFAL GDNGTLNLSG EGANNDYTNR
AGDDLRASSI GSTTYGQQVF RQGEPETHEG KLQYNAEYSF NDAAEFYSFG GYSKRRGETA
AFYRPSNASN NIAAIYPNGY LPLIHGTLED TTFVTGLRGE LADDWHYDLS ANYGKNSYEL
RTKTINTSLG LNTPRSFDNG TLTNDQKQLS LDLSREFNAT WLPYPVSVAF GAEYLRQGYQ
IEAGQAESYF QTGSSGLGGF RAADAGSYSR HNFAQYLDVE TNLTEKLGVS AAVRHEDYSD
FGSNVSGSLS ARYDFTPQVA LRGSVSTGFR APSLAQQNFT FTSSQLIGST IQEAGTFPAG
SNVAQLLGAE DLKPEKSRNY SLGLVLQPLD SLTVTADVYR IDIQDRISLS SNLVLNNTAI
NYLRANGVGD INYTSARYFT NATDTSTDGV DLVANYRYQF DNGVRWNSTV GYNYNHTKVT
DVKDNPAILN QLGVNLVRVD RRERIGLLGD TTPQHKLTLG NDLTFGNWAL HSNLVRYGEF
TSYQADKVND QTFSAAWLLD LAADYKLKNW VFTLGGDNVT DKYPEKLNDF SSSGGNLAYS
TFSPYGYSGA FYYGKVTYNW
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