| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2482 |
|---|
| Symbol | exbB-3 |
|---|
| ID | 1184134 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 2742562 |
|---|
| End bp | 2743290 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637393855 |
|---|
| Product | TonB system transport protein ExbB |
|---|
| Protein accession | NP_792294 |
|---|
| Protein GI | 28869675 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0811] Biopolymer transport proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.378751 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTAC TTGCTTCGCC TTTTGAATCC ATCGAACACG CGGTCATCTG GCTGCTGGTG
ATTTTCTCCG TTGCCACCTG GGGTCTTGCG TTGCTCAAGG GCGTGCAGTT CTCCCGCTTG
AAAGCCCAGG ACCGCAAGTT CCATAAGCAA TTCTGGGCTG CATCGAGCCT GGATTCCGCC
GCGCAATTGG CCCAGGAGCA ACCGGGCGCT GCTGCCCGCG TCGCGCTCGC CGGTTATGCG
GCCATTCAGG TGCCGGACGG CGCGCAGGCC AACGACCTCA GCCAGTCGAT CAATCATCAG
GACCGTCTTG AACGTGCCCT GCGCCAACAA ATCGTCCGTG AGCGCCGTTC GCTGGAAACC
GGTCTGGCAA TTCTTGCGAG TATTGGCAGC ACGTCGCCCT TCATCGGCCT GTTCGGGACG
GTCTGGGGCA TCATGTCGGC CCTCAAGGGG ATCAGCGCTG CAGGCTCTGC GAGCCTTGAA
ACCGTCGCCG GCCCGATTGG TGCGGCGCTT GTGGCAACCG GCGTCGGTAT TGCTGTCGCG
GTGCCTGCGG TGCTGGTCTA CAACTACTTT TTGCGTCGTT TGAAACTGAC CGCTGCCGAC
CTGGACGACT TTGCCCACGA CTTCTACAGC CTGGCGCAGA AGAGTGCGTT CCGCGTGCTG
CTTCATCCGG TCCTCAAGTC CGGCGCTGGC GCCGGGCAGG CCGCGCAGAA AGTGAAGGAG
GCGTCCTGA
|
|---|
| Protein sequence | MNLLASPFES IEHAVIWLLV IFSVATWGLA LLKGVQFSRL KAQDRKFHKQ FWAASSLDSA
AQLAQEQPGA AARVALAGYA AIQVPDGAQA NDLSQSINHQ DRLERALRQQ IVRERRSLET
GLAILASIGS TSPFIGLFGT VWGIMSALKG ISAAGSASLE TVAGPIGAAL VATGVGIAVA
VPAVLVYNYF LRRLKLTAAD LDDFAHDFYS LAQKSAFRVL LHPVLKSGAG AGQAAQKVKE
AS
|
|---|
| |