| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2472 |
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| Symbol | |
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| ID | 1184124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2729060 |
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| End bp | 2731045 |
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| Gene Length | 1986 bp |
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| Protein Length | 661 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637393845 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | NP_792284 |
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| Protein GI | 28869665 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.256702 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGTTC TTCAGCGAGT GATCGGTGGG TTTGCCGTGC TGGTGGTGTT GCTGCTCGCC
ATGGCGGGTA TCAGCTATCA AAGCACCCAT TCGATAAGCG AGCGCATCAG CATCATTACG
GGGCAGTCGG CACCGCTAAG CAGGGCGGCG AGTGAGCTTT ACGTGCATGT GCTGCGCGCC
AACCAGGCTC TGCTCGGGAT TTTGGTCAGC ACTGACCCCA AACAGATCGA CGAGGGCAAA
CAGCCGTTCA ACGACAGCAT GGCGCGCTTC AATCAGCTGC TGGACAGCAT TCCGGCCTAT
ACCGGCGACC GTGCCGAGCT GCGCGACAAC CTTAATCAGC AACGCCAACT CAGTACCGCC
TACGTAGAGC AGGCGCAAAC CCTGATCGCC AGCCATCGCC AGCACGTTTT GCAGGTGCTG
CAGAGCCGCG TCTTGCAGGG TTACAGCAAC AGCGAGGGTG CGCAGCTCAC CGGTTATCTG
CGCGATTACA TTGCCCGTGA GCGCACTACA GGTTCGTCCG AGAACGTGGC AGCGGCGGAA
AAGCTGCTGT TGGAAGTCGG CAAATCCTAT GAGGGGCTGG CCGCGCACGC CGCCACGCCG
GATATTCAGA CATTGCAGCG CGTGCTCAAC CTGCAGGATG AGGTGATCAG CACGCGGGCG
CGGGAGCTGA CAGCGGTTGA TCCGCGGGGC GGCCGTATTG CCGGGGTAAT GGTCAATCGC
TTGCTCAAAG ACCTGACCGG CGCTGACGGT GTCTATCAGG CCTACCGGCA GGAAGCGGCG
CTCGCCGAGC AGGTCGGCAA GCAGCGGCAG GCGGCAGAAG CGCGTTTGCA GGCAACGCTA
GACAAGATCG GCGAATTCGG CAATCAGTCG CTGGCAGTTG CCAACGAGGC CAAGGCCGGA
GCCGATTCGA CTATCGCCAC CAGCCTCAGT CTGTTGCTGA TCGCCTGCCT GTTGGCGGTG
TTGGCGGCAG CCATTATCGG TACATGGGTG GCCTTCAGCC TGCGGCGTCC ACTGGCGGCT
TTCCGTGGGG TGCTCAAAAC CCTTTCGGGT GGCGATATGC GGGTGCGTTT CGACGTCAGC
CGTCGGGATG AATTCGGTGA GCTGGGCGGC TATCTCAACG AGTTCACCCA GTCCTTGCAG
CAGACCTTTC GTGAGCTGAT TGGCTCTGCC GACACGCTCG CACTGACGGC CAGCCAGAAT
GCGCAGGTCA GTGAACAGAC CACCCGTGTT GTCGACGAGC AGAAAGACCG TTTGAACTCG
GCGGCTTCGG CGATGAATGA AATGGAAAGC ACCGTCGAAG AAGTGGCCCG CCGTGCGCAG
GACACGCGCA GTGCGGTGGA CAGCACCAGC GAGCTGACCA ACAAGGTACA GAAGCGTGTG
GCAGAAACCA TCGTCAACAT TCGCCAACAG GCCGAGCAGG TCAACAAGGC GTCGGCGGTG
ACTGATGAAT TGCAGAAGTA CGGGCAGAAC ATCGACGGTA TTGTCGATGC CATTCGCACG
ATTGCCGAAC AGACCAACCT GCTGGCCCTC AACGCAGCTA TCGAGGCTGC GCGTGCCGGG
GAGCAGGGCA GAGGCTTTGC GGTGGTCGCC GACGAAGTGC GCTCACTGGC CAGTCGTACC
CAGACATCGA CCAGCGAGAT CCAGGAAATG ATCGGCCAGA TGCAGAGCAA GATTCACTCG
GCCGTGCAGG TCATGAACGA AAGCCAGATC CAGTCCAATC ATTGCGTGAC GCTGGCCTCC
GGTGCCGATG AGTTGCTGGT GGAAATGAGC GAGGCGGTCG ATACGACTCG TGACATGAAC
ATCCAGATTG CTGCCGCCAC CGAGGAGCAG AGTGCCACTG TGCAGGAAAC CAGCCGCATG
GTCACGCACA TCAGTGATTC TGCACAGCAG GCGGCCGACG GTGCCGAACA GTCTGCCAGC
AGCAGTCAGG ACCTGTCGAA AATGGCCAGG GATCAGCGCG AGCTGCTCCA TCATTTCAGC
GTTTGA
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| Protein sequence | MTVLQRVIGG FAVLVVLLLA MAGISYQSTH SISERISIIT GQSAPLSRAA SELYVHVLRA
NQALLGILVS TDPKQIDEGK QPFNDSMARF NQLLDSIPAY TGDRAELRDN LNQQRQLSTA
YVEQAQTLIA SHRQHVLQVL QSRVLQGYSN SEGAQLTGYL RDYIARERTT GSSENVAAAE
KLLLEVGKSY EGLAAHAATP DIQTLQRVLN LQDEVISTRA RELTAVDPRG GRIAGVMVNR
LLKDLTGADG VYQAYRQEAA LAEQVGKQRQ AAEARLQATL DKIGEFGNQS LAVANEAKAG
ADSTIATSLS LLLIACLLAV LAAAIIGTWV AFSLRRPLAA FRGVLKTLSG GDMRVRFDVS
RRDEFGELGG YLNEFTQSLQ QTFRELIGSA DTLALTASQN AQVSEQTTRV VDEQKDRLNS
AASAMNEMES TVEEVARRAQ DTRSAVDSTS ELTNKVQKRV AETIVNIRQQ AEQVNKASAV
TDELQKYGQN IDGIVDAIRT IAEQTNLLAL NAAIEAARAG EQGRGFAVVA DEVRSLASRT
QTSTSEIQEM IGQMQSKIHS AVQVMNESQI QSNHCVTLAS GADELLVEMS EAVDTTRDMN
IQIAAATEEQ SATVQETSRM VTHISDSAQQ AADGAEQSAS SSQDLSKMAR DQRELLHHFS
V
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