| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2428 |
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| Symbol | |
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| ID | 1184080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2680315 |
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| End bp | 2681655 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637393803 |
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| Product | multidrug resistance protein NorM, putative |
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| Protein accession | NP_792242 |
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| Protein GI | 28869623 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00757728 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAACG TATCAATGGA GGCTAAAGGG TTACTGATAC TAGGGTTTCC AATCGCGGCA
ACCATGATTG CTCAGACATT AATGAGCCTT ACTGATCTGA TGCTGGTGAG CCGGCTGGGA
GAAAAACAGG TGGCCGGCGT ATCCTTGGGG ATAGCCGTGT ATTCTTTTGG AATGCTTTTC
GGATTGGGCG TCATAACTGC TGTGACGCCC ATGATTGCTA AAGCATATGG TCGAAAAGAT
TTCAACGCCG TTTCAAATTA CACCAGGCAG GGTTTGTGGG TGGCTGCTCT GGTCGCGATG
CCGGGGGTCA TAGCGTTAAT ATTAACTCGG TCAATACTGT TGTTTCTTAA CGTTGAGGCG
GAAACAGCAA ACATTGCTTC GGACTATTGT GTGGGTGCCC TTATGGGGTT GCCCGCTTTT
TTGATATATG TGAATTTGCG CTGTTTTCTT TCTGCCATCG GCCGACCCAA GACGACGACG
TGGATAATGT TCTTGGCGGT GCCGGTCAAT TACATCATCG GGCATGTGCT GATATTTGGC
GTGATGGACG CCGAAGGGCT AGGCATCACA GGCGCAGGGC TGGCCAGTAG TGTAACCCGA
CTGGCAATCC TGTCCACCGT CATAGCGACG TTGAAGTACG GGGCAGACTT CAAATGTTTT
TCTTTATTTG AAAACGTTAT GAATGTCAAA CCAGTCGTGG TTAAAAAGAT CGTCTTATTA
GGGCTTCCGG TAGGCGTCAG AATTCTTCTT GCCGAGGGAA TGCTGCCCAT AATAGCGCTG
CTAATTAGTA CCCTGGGTAC TATTGACTTG GTTGCGCATA TGGTAGCGGT GCGTCTGTCC
GGCGTCAGCG CAGTCATTGC ATTGGGTTTT TCAAGTGCGG CGTCTACACG CGTTGCATGG
CAGGTGGCGG CTAACAATCA GAATGGAGTC AGGGTAACGG GATATGTTGC GTCTGCTCTT
GCTTTCGGCG TGTCAGCGCT GTTGGCCATG CTGTTGATTT TTTTTCCAAC AGAGTTGGTC
ATGCTTTTAT TCGATATTGA TGACGCAGAA GTATTAGCCC TGACGTCCCA CCTACTAAAA
GTGGTGGCCG CTTATCAAAT ATTAAATGCC ATTCAGACGG CCGTTGTTGG ATCACTGCTA
GGGGTGTCAG ATACTAAAAT TCCAACCTGT TTAGTCTTGA TAGGAAACTG GTTGGTTGGG
CTCGCTTCTG CGTATGGTCT GGTTGTTTTA TTTGAAGCAA CCGTCACGGC GGTTTGGGGT
GGGCTTGTAC TAGGGCAAGT GTTCGTGGTG GTCACGTGCC TGTGCAGGTT CCACATGAAA
ACGAAGGCGC TTCACGAATA A
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| Protein sequence | MANVSMEAKG LLILGFPIAA TMIAQTLMSL TDLMLVSRLG EKQVAGVSLG IAVYSFGMLF
GLGVITAVTP MIAKAYGRKD FNAVSNYTRQ GLWVAALVAM PGVIALILTR SILLFLNVEA
ETANIASDYC VGALMGLPAF LIYVNLRCFL SAIGRPKTTT WIMFLAVPVN YIIGHVLIFG
VMDAEGLGIT GAGLASSVTR LAILSTVIAT LKYGADFKCF SLFENVMNVK PVVVKKIVLL
GLPVGVRILL AEGMLPIIAL LISTLGTIDL VAHMVAVRLS GVSAVIALGF SSAASTRVAW
QVAANNQNGV RVTGYVASAL AFGVSALLAM LLIFFPTELV MLLFDIDDAE VLALTSHLLK
VVAAYQILNA IQTAVVGSLL GVSDTKIPTC LVLIGNWLVG LASAYGLVVL FEATVTAVWG
GLVLGQVFVV VTCLCRFHMK TKALHE
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