| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2427 |
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| Symbol | |
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| ID | 1184079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2679142 |
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| End bp | 2680236 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637393802 |
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| Product | serine hydroxymethyltransferase, putative |
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| Protein accession | NP_792241 |
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| Protein GI | 28869622 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000841393 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCGGGCA AAAGGCCATT TGCGGGAGCC AGGTTTCATG ATGAAATAGA GCGAACGGCA
GCTCTGATAG CCTGTCGAGT ATTTAATGCC GAACATGCCA ACCTGCAGCC CCATTCATGT
AGCCAGGCCA ATCAGTCTGT GTATCACGCG CTCCTGGAAC CAGGTGACAA CGTGCTGGCA
TTAAACTTTA AAGCTGGTGG CCACCTGACG CATGGCCACA AGGTGAATTT CTCCGGCATG
TTTTTTAATT TTCGCCACTA CGGTGTGGAT GAAGCAACTG ACTTGATAGA CTATGATCTC
GCCGAGCAGG ACGCTATCAG ATTTAAACCC AAACTCATTG TCTGTGGCTC TTCGTCCTAC
CCCAGGCTCT TCGACGCGCG TCGACTTCGG GAGATCAGTG ATAAGGTTGG TGCGCTGCTG
ATGTTCGATT TATCGCATGA AGCAGGGCTG ATTGCCTGTG GTGCCATTCC CAACCCCGTG
CCGCTGGCTG ACGTTGCCAC GATGTCAATG GATAAAACAA TGCGCGGGGC ACACGGTGCA
ATTATATTAT GCACTGCAAA AATAGCTCAA AAAATAGACA AGGGCGTACA CCCCGGAACG
CAATCCAGCT TTCCAATATC CCGACTGACT CAAACCGCTC AGGCGTTGCT GCACAGTCAA
ACAGCCGAAT TCAGGGAGTA TGCAAACAGG GTGTTGGATA ACGCTCTATT GTTAGAGCAA
CATTTCCTGT GTATCCCTAA TCTTCTGGTG ACGGGGGGGA CGGATAAACA TTATCTCGTT
CTGAACACTA AAGCTGCGTT CGGGATAGAC GGCGTTCTCG CCGAGCAAAG GCTGGAAGCT
ATTTCAGTGC TCAGCAGCCG GCAGACGTTG CCCGGCGATC GTACGTCAAG AATAGACGAC
GCTGGCGGAA TAAGGTTGGG CACCGCTTGG ATTACCTCGA GAGGCTATGA GCTGGACGAA
GTTTCAGCGC TGGCGACGAT TATTATTGAG GCCTTGTCCC CGTCATTTGA CGATGCCAAA
AAACACCATC TGTTAAGCAG GGTCAATACC CTGATCGCCA CCGACAAGCC AAAGGATGTC
TGGCGAAATA GTTGA
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| Protein sequence | MAGKRPFAGA RFHDEIERTA ALIACRVFNA EHANLQPHSC SQANQSVYHA LLEPGDNVLA
LNFKAGGHLT HGHKVNFSGM FFNFRHYGVD EATDLIDYDL AEQDAIRFKP KLIVCGSSSY
PRLFDARRLR EISDKVGALL MFDLSHEAGL IACGAIPNPV PLADVATMSM DKTMRGAHGA
IILCTAKIAQ KIDKGVHPGT QSSFPISRLT QTAQALLHSQ TAEFREYANR VLDNALLLEQ
HFLCIPNLLV TGGTDKHYLV LNTKAAFGID GVLAEQRLEA ISVLSSRQTL PGDRTSRIDD
AGGIRLGTAW ITSRGYELDE VSALATIIIE ALSPSFDDAK KHHLLSRVNT LIATDKPKDV
WRNS
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