Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2399 |
Symbol | rbsB-2 |
ID | 1184051 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 2648568 |
End bp | 2649500 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637393775 |
Product | ribose ABC transporter, periplasmic ribose-binding protein |
Protein accession | NP_792214 |
Protein GI | 28869595 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCATGA CCAAAAAACT GCTGCTCGCC ACGGCTCTGG CCGCCGTTAC CCTCACCACC GCAGGCTCGA CCTGGGCCAA AGAGCTGACC ATCGGCCTGG CCGTGGCCAA TCTGCAGGCT GACTTCTTCA ACCAGATCAA ACAGTCGGTC GAAGCCGAAG GCAAAGCTCG CGGGGTAAAG ATCATCACCG TTGACGCACA GGGCAATTCC TCGACTCAGG TCAGCCAGAT CGAAGACCTG ATCACCCGCC AGATTGACGC ACTGATCTAC ATTCCGGCTG GCGCCACTGC CGCCGGGGTG CCGGTCAAAG CCGCCAAGGC TGCGGGAATC CCGGTGATTG CAGTGGACCG CAACGCGCCT GACGCACCCG GCGACACGTT TATTGCCAGC GACAGCGTGG CGGGAGCCAA AGCCCTCGCC GAGTACGTGG GCAAAGTCAC CGACGGCAAA GGACGCATCG CGATTCTTCA AGGCCAACTG GGCACCACCC CGGAAAACGA CCGGGCGAAA GGCTTTCAGG AAGGCTTGAA AGGCTTCCCC GGCCTGAAGG TCGTGGCTGA ACAGCCTGCC GAGTGGGCGC AGGACAAAGG CTTTGCAGTC GCTCAGGACC TGTTGCAGCG TGACCCGAAC ATCACCGTAT TCTTTGGCCG CGCCGATGCG ATGGCGCTCG GCGCTGCCCA GGCGGTAAAA GTCGCCAACC TGTCACAACC CGTGGTGGTG GTCGGTTTCG ACGGCGACGT GGCAGGCCTC AAGGCGGTGG CCAGCGGCGT GCTGCAAGCA ACCATGACCC AGCAAACGCA GAAAATGGGC CGCATGGCCG TCGCCTCTGC GTTGGACCTC AAGGCTGGCA AAGCCGTACC CAAGGAACAA CTCCTCGAAA CCGTGCTGAC CACCAAAGAC AACGTCGCGC CTTTCCTGCA ACAGCATCCT TAA
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Protein sequence | MFMTKKLLLA TALAAVTLTT AGSTWAKELT IGLAVANLQA DFFNQIKQSV EAEGKARGVK IITVDAQGNS STQVSQIEDL ITRQIDALIY IPAGATAAGV PVKAAKAAGI PVIAVDRNAP DAPGDTFIAS DSVAGAKALA EYVGKVTDGK GRIAILQGQL GTTPENDRAK GFQEGLKGFP GLKVVAEQPA EWAQDKGFAV AQDLLQRDPN ITVFFGRADA MALGAAQAVK VANLSQPVVV VGFDGDVAGL KAVASGVLQA TMTQQTQKMG RMAVASALDL KAGKAVPKEQ LLETVLTTKD NVAPFLQQHP
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