| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2396 |
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| Symbol | |
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| ID | 1184048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2645396 |
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| End bp | 2646196 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637393772 |
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| Product | oxidoreductase, short chain dehydrogenase/reductase family |
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| Protein accession | NP_792211 |
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| Protein GI | 28869592 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.084933 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATCAAC GTTTTAGCGG TAAAACCGTG GTTATCACCG GCGCGTGCCG AGGCATCGGC
GCAGGCATTG CCGAGCGCTT CGCTCAGGAA GGCGCCAATC TGGTGCTGGC TTCCAACGAC
CTCGAACGTA TGACGTTCAG CTCCGAGCAA CTGGCCAGCG AATACTCGGT CAACAGCCTG
GCACTTGGCA TCGACGTCAC CGACGAGGCC GACATACAGC GCCTGTACCA GAGCGCCCAC
GAGCGCTTCG GCAGCATCGA TGTGTCGGTG CAAAACGCCG GCATCATCAC CATCGACCAT
TGCGAAAGCA TGCCCCGCGC AGACTTCGAC AAGGTCCTGC AGGTCAACAC CACCGGCGTC
TGGCTCGGCT GCCGGGAAGC CGCCCGCTAT ATGGTCAAAC AAGGCAGCGG ACGGTTGATC
AACACCTCGT CAGGCCAAGG CCGCCAAGGC TTCATCTACA CTCCCCATTA CGCCGCGAGC
AAGATGGGCG TGATCGGCAT CACCCAAAGC CTTGCGCTGG AACTGGCGCG GCATAACATC
ACGGTGAATG CCTTCTGCCC CGGTATCATC GAAAGTGAAA TGTGGGACTA CAACGACCGG
GTCTGGGGCG AAATCCTCGG CACCGAAGAA AAACGCTACG CCAAGGGCGA ACTGATGGCC
GAGTGGGTCC GCAACATCCC CATGCGCCGC GCCGGCAAAC CCTCGGACGT GGCCGGGCTG
GTCGCCTTTC TGGCCTCGGA CGACGCCGCC TACCTGACCG GCCAGGCGAT CAACATCGAC
GGCGGGCTGA TCATGTCCTG A
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| Protein sequence | MYQRFSGKTV VITGACRGIG AGIAERFAQE GANLVLASND LERMTFSSEQ LASEYSVNSL
ALGIDVTDEA DIQRLYQSAH ERFGSIDVSV QNAGIITIDH CESMPRADFD KVLQVNTTGV
WLGCREAARY MVKQGSGRLI NTSSGQGRQG FIYTPHYAAS KMGVIGITQS LALELARHNI
TVNAFCPGII ESEMWDYNDR VWGEILGTEE KRYAKGELMA EWVRNIPMRR AGKPSDVAGL
VAFLASDDAA YLTGQAINID GGLIMS
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