Gene PSPTO_2378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2378 
SymbolthrS 
ID1184029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp2627367 
End bp2629289 
Gene Length1923 bp 
Protein Length640 aa 
Translation table11 
GC content58% 
IMG OID637393754 
Productthreonyl-tRNA synthetase 
Protein accessionNP_792194 
Protein GI28869575 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0441] Threonyl-tRNA synthetase 
TIGRFAM ID[TIGR00418] threonyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.423573 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAACTA TTACTCTTCC CGACGGCAGT CAACGTTCAT TCGATCATGC GGTTTCCGTA 
GCCGATGTCG CGCTTTCAAT CGGCGCCGGT CTGGCCAAGG CCACCGTTGC CGGTAAAGTC
GACGGCAAAC TGGTCGACGC CTGCGACCTG ATCGAAAACG ATGCCAGCCT GCAGATCATC
ACCCCCAAGG ACGCAGAGGG ACTGGAGATC ATCCGTCACT CCTGCGCTCA CCTGGTAGGG
CATGCGGTCA AGCAGTTGTA TCCGACTGCG AAAATGGTCA TCGGCCCGGT GATCGACGAC
GGCTTCTATT ACGATATCGC CTACGAGCGC CCGTTCACGC CTGACGACCT GGCGGCGATC
GAGCAGCGCA TGCAGCAGCT GATCGAAAAA GATTACGACG TCATCAAGAA AGTCACTCCG
CGCGCCGAAG TGATCGAGGT GTTCACCGCC CGTCACGAGG ACTACAAGCT GCGCCTTGTA
GAAGGCATGC CGGATGAGCA GGCCATGGGC CTGTATTACC ACGAAGAATA CGTCGACATG
TGCCGCGGTC CGCACGTGCC GAACACCCGC TTCCTGAAGT CGTTCAAGCT GACCAAACTG
TCGGGTGCCT ACTGGCGCGG CGATGCCAAG AACGAGCAAT TGCAGCGCGT TTACGGCACC
GCTTGGGCAG ACAAGAAGCA ACTGGCAGCT TACATCCAGC GGATCGAAGA AGCCGAGAAG
CGCGACCATC GCAAGATCGG CAAGCGCCTC GGCCTGTTCC ACACCCAGGA AGAGGCGCCG
GGCATGGTGT TCTGGCACCC GCAGGGCTGG ACCCTGTATC AGGTGCTTGA ACAGTACATG
CGCAAAGTGC AGCGCGAAAA TGGCTACCTT GAGATCAAAA CCCCGCAAGT GGTCGATCGC
TCGCTCTGGG AAAAATCCGG GCACTGGGCC AACTACGCCG ACAACATGTT CACCACGCAG
TCCGAAAGCC GCGACTACGC CATCAAGCCG ATGAACTGCC CGTGCCACGT GCAGGTGTTC
AATCAGGGCC TGAAAAGCTA CCGCGAGCTG CCGCTGCGTC TGGCCGAGTT CGGTGCCTGC
CACCGTAACG AGCCGTCGGG TGCCCTGCAC GGCATCATGC GCGTACGTGG TTTCACTCAG
GACGACGCGC ACATCTTCTG CACCGAAGAC CAGATGCAGG CCGAGTCCGC CGCATTCATC
AAGCTGACGC TGGATGTCTA CGCCGATTTC GGTTTCAAGG ATATCGAACT GAAATTGTCC
ACTCGCCCTG AAAAGCGTGT AGGCTCCGAC GAGCTTTGGG ATCGTGCCGA ATCGGCGCTG
GCTTCCGCAC TCGACAGCGC AGGCCTGCCT TACGACCTGC AGCCGGGCGA AGGTGCGTTC
TACGGTCCCA AAATCGAGTT TTCCCTCAAG GATTGTCTCG GTCGGGTATG GCAGTGTGGC
ACCTTGCAGC TGGACTTCAA TCTGCCGATC CGTCTGAGTG CAGAGTACGT TTCGGAAGAC
AACAGTCGCA AGAATCCGGT CATGTTGCAC CGCGCAATTC TTGGGTCGTT CGAGCGTTTC
ATCGGAATTC TGATCGAGCA TTACGAAGGC GCGTTTCCAG CCTGGCTGGC GCCAACCCAG
GCAGTGATCA TGAATATCAC TGACAAACAG GCCGATTTTG CCCTTGAAGT GGAAAAAACT
CTGGCTGAAA GCGGGTTTCG TGCCAAGTCC GACTTGAGAA ATGAAAAGAT CGGCTTTAAA
ATCCGTGAGC ATACTTTGCT CAAGGTTCCC TATCTCCTCG TGATTGGAGA TCGGGAAGTT
GAAATGCAAA CTGTCGCTGT GCGTACACGT GAAGGCGCTG ACCTTGGCTC GATGCCGGTC
GCCCAGTTCG CTGAATTCCT CGCACAAGCG GTTTCCCGGC GTGGTCGCCA AGATACGGAG
TAA
 
Protein sequence
MPTITLPDGS QRSFDHAVSV ADVALSIGAG LAKATVAGKV DGKLVDACDL IENDASLQII 
TPKDAEGLEI IRHSCAHLVG HAVKQLYPTA KMVIGPVIDD GFYYDIAYER PFTPDDLAAI
EQRMQQLIEK DYDVIKKVTP RAEVIEVFTA RHEDYKLRLV EGMPDEQAMG LYYHEEYVDM
CRGPHVPNTR FLKSFKLTKL SGAYWRGDAK NEQLQRVYGT AWADKKQLAA YIQRIEEAEK
RDHRKIGKRL GLFHTQEEAP GMVFWHPQGW TLYQVLEQYM RKVQRENGYL EIKTPQVVDR
SLWEKSGHWA NYADNMFTTQ SESRDYAIKP MNCPCHVQVF NQGLKSYREL PLRLAEFGAC
HRNEPSGALH GIMRVRGFTQ DDAHIFCTED QMQAESAAFI KLTLDVYADF GFKDIELKLS
TRPEKRVGSD ELWDRAESAL ASALDSAGLP YDLQPGEGAF YGPKIEFSLK DCLGRVWQCG
TLQLDFNLPI RLSAEYVSED NSRKNPVMLH RAILGSFERF IGILIEHYEG AFPAWLAPTQ
AVIMNITDKQ ADFALEVEKT LAESGFRAKS DLRNEKIGFK IREHTLLKVP YLLVIGDREV
EMQTVAVRTR EGADLGSMPV AQFAEFLAQA VSRRGRQDTE