| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2367 |
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| Symbol | rbsB-1 |
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| ID | 1184018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2618254 |
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| End bp | 2619213 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637393743 |
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| Product | ribose ABC transporter, periplasmic ribose-binding protein |
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| Protein accession | NP_792183 |
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| Protein GI | 28869564 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.107926 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGCTGC CATTTGCTGG ACGCCTTCTC GCTGTCGCCA TGTTTGCTGC CGTCACGGCA
GTCATGCCCC TTTCTGCTGC ATACGCCCAG ACGCCTGAAA AGCCCAAGGT CGCACTGGTC
ATGAAATCGC TGGCCAACGA ATTCTTCCTG ACCATGGAAG ATGGCGCCAA GGCCTACCAG
AAAGAACACG CCAACGACTT CGACCTGATC TCCAACGGCA TAAAGGACGA GTCCGATACT
TCGGCTCAGA TCCGCATCGT CGAGCAGATG ATCGTTTCCA GAGTCGATGC GCTGGTTATC
GCGCCTGCCG ACTCCAAGGC CCTGGTGCCG GTGCTCAAGA AAGCCACCGA CGCTGGAATC
AAGGTCGTCA ACATCGACAA CCAGCTTGAC CCTGATGTGC TCAAGAGCAA AAGCCTGATG
ATCCCGTTCG TGGGCCCGGA CAACCGCAAA GGTGCCGAGC TGGTGGGCGA CTACCTGGCC
AGGCAACTGA AAAGCGGTGA CGAAGTCGGC ATTATAGAAG GTGTGTCCAC CACCACCAAT
GCGCAGCAGC GTAGCGCCGG TTTCAAAGAC GCTATGGACA AGGCGCAAAT GAAAGTGGTG
TCCACGCAGT CCGGCAATTG GGAAATCGAC AAGGGCAACG CAGTGGCCTC GGCGATGCTC
AATGAATACC CGAACCTGAA AGCGCTGCTG GCCGGCAACG ACAGCATGGC GCTGGGTGCA
GTGTCTGCCG TGCGTGCAGC AGGCAAGGCA GGCAAGGTCA TGGTGGTCGG TTACGACAAC
ATCAACGCGA TCAAACCGAT GCTCAAGGAT GGCCGGGTGC TGGCCACCGC TGACCAGTTT
GCAGCCAAAC AAGCGGTCTT TGGTATTGAA GCTGCGTTGA AGCTGGTCAA AGGCGAGAAG
GTCGACACCA ACGAAAAAGG CGTCATCGAA ACGCCAGTAG AACTCGTTAC CAAACCTTGA
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| Protein sequence | MKLPFAGRLL AVAMFAAVTA VMPLSAAYAQ TPEKPKVALV MKSLANEFFL TMEDGAKAYQ
KEHANDFDLI SNGIKDESDT SAQIRIVEQM IVSRVDALVI APADSKALVP VLKKATDAGI
KVVNIDNQLD PDVLKSKSLM IPFVGPDNRK GAELVGDYLA RQLKSGDEVG IIEGVSTTTN
AQQRSAGFKD AMDKAQMKVV STQSGNWEID KGNAVASAML NEYPNLKALL AGNDSMALGA
VSAVRAAGKA GKVMVVGYDN INAIKPMLKD GRVLATADQF AAKQAVFGIE AALKLVKGEK
VDTNEKGVIE TPVELVTKP
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