Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2304 |
Symbol | |
ID | 1183955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 2550630 |
End bp | 2551841 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637393683 |
Product | nitrate transporter |
Protein accession | NP_792123 |
Protein GI | 28869504 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2223] Nitrate/nitrite transporter |
TIGRFAM ID | [TIGR00886] nitrite extrusion protein (nitrite facilitator) |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.144946 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATACAA GCTTCTGGAA GGCCGGTCAC AGACCGACCC TGTTCGCAGC CTTTCTGTAT TTCGACCTGA GCTTCATGGT CTGGTACCTG CTTGGCCCGA TGGCGGTACA AATCGCCACC GACCTGCACC TCACGACTCA ACAGCGCGGC CTGATGGTGG CCACGCCGAT TCTGGCCGGT GCCGTGCTGC GCTTGTTCAT GGGTCTGCTG GCCGACCAGT TGTCCCCCAA GACAGCCGGC ATCATCGGTC AGGTGATTGT GATCGGTGCC TTGTTCACTG CCTGGCAATT GGGTATTCAC AGCTACGAGC AGGTCTTGCT GCTAGGCCTG TTCCTGGGCA TGGCCGGCGC GTCGTTCGCC GTTGCGTTGC CGCTGGCCTC GCAGTGGTAT CCGCCACAGC ACCAGGGCAA GGCGATGGGT ATTGCCGGTG CCGGCAACTC CGGCACCGTG CTGGCGGCAT TGATCGCACC GGTGCTGGCG GCCAGTTTTG GCTGGGGCAA TGTGTTCGGC CTGGCGCTGA TCCCGCTGGT TCTGACGCTG ATTGCCTTCA CCCTGATGGC GCGCAACGCG CCGGAGCGCA GCAAACCCAA ATCCATGGCG GATTACCTCA AGGCACTGGG CGACCGTGAC AGCTGGTGGT TCATGTTTTT CTACAGCGTG ACCTTCGGTG GCTTCATCGG TCTGGCCAGC GCCCTGCCCG GCTACTTCAA CGACCAGTAT GGCCTGAGTC CGATCACGGC CGGTTACTAC ACCGCAGCCT GTGTGTTCGG CGGCAGCCTG ATGCGCCCGC TCGGTGGCGC GCTGGCCGAC CGCTTTGGCG GGATCCGCAC CCTGACCGTG ATGTACACGG TAGCTGCTGT CGGTATCGCG GCAGTGGGCT TCAACCTGCC GAGTTCGTGG GCAGCACTGG CGTTGTTCGT TGCAGCGATG CTTGGCCTGG GTGCCGGTAA CGGTGCAGTC TTCCAGTTGG TGCCGCAGCG GTTCCGCAAG GAAATCGGCG TGATGACCGG CCTGATCGGG ATGGCTGGCG GTATCGGCGG CTTCCTGCTG GCAGCCGGTC TGGGCGCCAT CAAGCAGAAT ACCGGTGATT ACCAGTTGGG CCTGTGGCTG TTCGCAGGTC TGGCGGTACT GGCCTGGTTC GGCCTGTTGA ACGTCAAGCG TCGCTGGAGA ACCACCTGGG GTTCGGCGGC CGTGACCGCG GCGCGGGTCT GA
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Protein sequence | MDTSFWKAGH RPTLFAAFLY FDLSFMVWYL LGPMAVQIAT DLHLTTQQRG LMVATPILAG AVLRLFMGLL ADQLSPKTAG IIGQVIVIGA LFTAWQLGIH SYEQVLLLGL FLGMAGASFA VALPLASQWY PPQHQGKAMG IAGAGNSGTV LAALIAPVLA ASFGWGNVFG LALIPLVLTL IAFTLMARNA PERSKPKSMA DYLKALGDRD SWWFMFFYSV TFGGFIGLAS ALPGYFNDQY GLSPITAGYY TAACVFGGSL MRPLGGALAD RFGGIRTLTV MYTVAAVGIA AVGFNLPSSW AALALFVAAM LGLGAGNGAV FQLVPQRFRK EIGVMTGLIG MAGGIGGFLL AAGLGAIKQN TGDYQLGLWL FAGLAVLAWF GLLNVKRRWR TTWGSAAVTA ARV
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