Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2302 |
Symbol | |
ID | 1183953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 2547449 |
End bp | 2548678 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637393681 |
Product | assimilatory nitrate reductase electron transfer subunit domain protein |
Protein accession | NP_792121 |
Protein GI | 28869502 |
COG category | [C] Energy production and conversion |
COG ID | [COG1251] NAD(P)H-nitrite reductase |
TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0640092 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAC TCAAACTGGT GATGATTGGC AACGGCATGG CCGGCGTGCG CACACTCGAA GAGTTGTTGA AGCTGAGCGA AGACCTGTAC GACATCACCG TCTTCGGCGC CGAGCCACAC CCCAACTACA ATCGCATCCT GCTGTCGCCG GTGCTGGCCG GCGAGCAGAA CTTCGAAGAC ATAGTGCTCA ACGATCTGGC CTGGTACCAA AGCAACGGTA TCCAGCTGTT GCTGAACCGC CGTGTGGTCA AGATCGATCG CATCAAGCGC CTGGTGATCG CCGATGACGG CACCCAGGCC CATTATGACC GACTGTTGAT CGCCACCGGG TCACGCCCTT TCATTCTGCC GATCCCCGGC AACACGCTGG ACGGCGTGAT CGGCTATCGC GACATCGGTC ACACCCGGCA GATGATCGAC ACCGCCGTCA CACACAAACA CGCAGTCGTC ATCGGCGGCG GCCTGCTAGG GCTGGAAGCG GCCAACGGCC TGAGCCTGCG CGGCATGCAG GTCACGGTCA TTCATAACGG TCAGACCCTG CTGGAACGCC AGCTGGACAA GACCAGCGGC CTGATGCTGC AAGCCGCGCT GGAGCTGCGC GGCCTGAGCT TTCGCCTCAA TGAACAGACC CAAGCCTTGC TCGGCGATGA CCAGGGGCGC GTGCGGGCCG TGCAATTGAA GAACGGCGAC GTCATTGACG CAGACCTGGT GGTCATGGCA GCAGGCATAC GGCCCAACAC CGAGCTGGCC GAACAGGCGG GCTTGCCGTG CAACCGCGGA ATTCTGGTCA ACGACACGCT GCAGACCTTC GATCCGCGCA TCTATGCCAT CGGCGAGTGC GTCAGCCATC GCGGCATCGC CTACGGGCTG GTCGCGCCGC TGTTCGAACA GGCCCGGGTC TGCGCCAATC ACCTCGCCCA GCTCGGGTCT GCCCGCTATC CGGGCTCGGT CACCTCGACC AAGCTGAAAG TCACGGGTAT CGACCTGTTT TCGGCCGGTG ATTTTCTGGG TGGCGAGGGC ACTGAAAGCA TCACCCTCTC GGACCCCATC GGCGGTGTCT ACAAGAAGCT GGTGATCAAA AATGACATTC TGGTCGGCGC CTGCCTGTAC GGCGACACCG CCGACGGCAG TTGGTACTTA CAACAGATCC GTGATGGCCA GGGCATTGAT GCCATCCGCA ATCACCTGAT GTTCGGCAAA CCCGCTGCCA CACCGGCTGC TTGCGCATGA
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Protein sequence | MKKLKLVMIG NGMAGVRTLE ELLKLSEDLY DITVFGAEPH PNYNRILLSP VLAGEQNFED IVLNDLAWYQ SNGIQLLLNR RVVKIDRIKR LVIADDGTQA HYDRLLIATG SRPFILPIPG NTLDGVIGYR DIGHTRQMID TAVTHKHAVV IGGGLLGLEA ANGLSLRGMQ VTVIHNGQTL LERQLDKTSG LMLQAALELR GLSFRLNEQT QALLGDDQGR VRAVQLKNGD VIDADLVVMA AGIRPNTELA EQAGLPCNRG ILVNDTLQTF DPRIYAIGEC VSHRGIAYGL VAPLFEQARV CANHLAQLGS ARYPGSVTST KLKVTGIDLF SAGDFLGGEG TESITLSDPI GGVYKKLVIK NDILVGACLY GDTADGSWYL QQIRDGQGID AIRNHLMFGK PAATPAACA
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