Gene PSPTO_2278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2278 
Symbol 
ID1183929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp2519390 
End bp2519893 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content60% 
IMG OID637393657 
Productuniversal stress protein family 
Protein accessionNP_792097 
Protein GI28869478 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000472572 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTCGTT CGATGCTGTA TGCCACAGAC CTCGGTCTGT ACGCGCCTTA TGTCATGCAG 
CACGCGCTGG CGCTGGCTCG AACGTTCGAT GCCGGGTTGT ACGTTGTCCA TGTCGTTGAG
CCCATGGGCC TGTTTGCCGA GTCGGTGCTG CAGAGTTATC TGGGCGAGGA GGCGTTGCAG
GAACTGCACG GCAAGGGTGC CCATGCGTTC ATGGAGGGCA TTGAGCAGCG GATGCTCGAC
GGTTTTCGTG AAGAGCTGGG GGAAGGCCAC AGCGACTTGT CCCTGATCCG CACAGTGCGT
GTCGTTCAGG GAGAGCCGGC CAGCGTGATC ATCGAGCAGG CACATAAACT GGAAGTGGAT
TTGCTGGTGC TCGGCCGTCA CAGCGCCAGC GCGCAAGAGG GCGCGTCGAT AGGTCGAACG
GCCGCCAGGA TTCTGCAGTC CTCCGGGGTG CCGGTGTACA TGGTGCCCAT TATGTCGAAA
GCGTTATGTC AGAAGGGATG TTGA
 
Protein sequence
MVRSMLYATD LGLYAPYVMQ HALALARTFD AGLYVVHVVE PMGLFAESVL QSYLGEEALQ 
ELHGKGAHAF MEGIEQRMLD GFREELGEGH SDLSLIRTVR VVQGEPASVI IEQAHKLEVD
LLVLGRHSAS AQEGASIGRT AARILQSSGV PVYMVPIMSK ALCQKGC