Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2277 |
Symbol | |
ID | 1183928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2518391 |
End bp | 2519311 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637393656 |
Product | 5'-nucleotidase, putative |
Protein accession | NP_792096 |
Protein GI | 28869477 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000234456 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGAAT CAGATGATCA CAAACTGGTA CTGGCGATTT CATCGCGGGC GCTGTTTGAC CTGCGCGACA GCCATGCTGT TTACATGGCC GAAGGGGTTG AGGCGTACCG CAAGTATCAG ATCGAGCACG AAGACGAGAT TCTCGAGCGC GGCGATGCCT TCACCCTGGT GGAAAAACTG CTCAACCTCA ATGCCAGCCT GAGCAAGGCA CGCGTCGAAG TGGTGCTGGT GTCGCGCAAC AGTGCCGACA CCGGTTTGCG GGTCTTCAAT TCCATCCAGC ACTACGGGCT GGACATCGCC CGTGCAGCCT TTGCCGGCGG GCGCAGTCCT TATCCCTACC TGGCGGCGTT TGGCTGCCAC CTGTTTCTCT CGACACATGC CGAAGACGTG CGCAGCGCGC TGGATGCAGG GTTTGCAGCG GCGACCATTC TTTCCGGCGG CGCCAGGCGT GCTGCCAGCG CCGAATTGCG CATTGCCTTT GATGGCGATG CGGTGTTGTT TTCCGATGAA TCGGAGCGGG TCTACCAGAG TGGCGGCCTG GCTGCGTTCC AGGCCAGCGA GCGTGAATCG GCTCGCGAAC CCTTGCGCGG CGGGCCGTTC AAACCGTTTC TCGCTGCGCT CAATCAATTG CAACGCGAGT TTCCCGACGC AAGCTGCCCG ATCCGCACGG CGCTGGTCAC GGCGCGCTCG GCACCCGCCC ACGAACGGGT GATTCGCACC TTGCGCGAAT GGGACATCCG TCTGGACGAG TCGCTGTTTC TCGGCGGCTT GCAGAAGTCG GCCTTCCTTG AGGCGTTCGC CGCCGATGTG TTTTTCGATG ATCAGCCCGG TCACTGTGAA AAAGCGCGTG AGGTGGTAGC TACAGGCCAC GTTCCGCATG GCATCAGTAA CGAGATAATT CCGTTCGATG GCGGGGGCTG A
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Protein sequence | MTESDDHKLV LAISSRALFD LRDSHAVYMA EGVEAYRKYQ IEHEDEILER GDAFTLVEKL LNLNASLSKA RVEVVLVSRN SADTGLRVFN SIQHYGLDIA RAAFAGGRSP YPYLAAFGCH LFLSTHAEDV RSALDAGFAA ATILSGGARR AASAELRIAF DGDAVLFSDE SERVYQSGGL AAFQASERES AREPLRGGPF KPFLAALNQL QREFPDASCP IRTALVTARS APAHERVIRT LREWDIRLDE SLFLGGLQKS AFLEAFAADV FFDDQPGHCE KAREVVATGH VPHGISNEII PFDGGG
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