Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2254 |
Symbol | |
ID | 1183905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 2496461 |
End bp | 2497936 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637393634 |
Product | methyl-accepting chemotaxis protein |
Protein accession | NP_792074 |
Protein GI | 28869455 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.177753 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCTCAT GGCTTGGCAA CCTTTCACTG AAGTACAAAT TCTGGGCCGT CAACGCGGTC GCTTTTTTCA CCACGCTGTT GCTGGTGCTG TTCGCCCTGC AACTCGAACA ACAGGCACGC GCAGAAACCT CACGCCAAGC TGCGCAAGCC CAGGCGCGGC TTCTGAGCGC CTGGCCTGCC GACAAACCGC TGCCCTCCAG CGACACGCTG CTGGTCTACA CCCAAGGTCA GGCGCCCGTG CTGAACGGGC TGGCGCTGCC AGAACTGGCA AACGGCAGCG GCTGGGTTGC ACTGGATAAA CCGTCTGGTG GTCAATGGCT GAACGGGGCC TGGCTTGCGC CCGCAAATAA GGGTCAGCAG CTTGCCGTGC TGGCCTTTAC CCCGACCTTC AAGCAAATAC TGCTGGATCG CTTCACGCAC TACGCCGCCG CCGTTTTTGT GCTGATGTTG CTGATGCTCT GCGCCTCGCA ACTGTTGATC CGTTTTTTGC TCAGCCAGCT CAACGCGCTC AAGGACGTGA TGCTGCATGT CGAGAAAAGC GGCGACCTGT CAGCCCGCGT AGCCAACCGC AGTGACGACG AAGTGGGGCA GATGGCCAAG GCCTTCAACG CTATGCAGGC CGGATACCAG CGGGTGGTCA ACACCGTTTC GCAGACCGCC AGCCGCCTCG ATGAGGGCGC CGCGCATCTG GCCTCGGGCA TGAAGGATGT GCGCCAGGGC ATGCTCGGCC AGCAAAGTGA AACCGATCAG GTGGCCACCG CGATCAACGA GATGACGGCC ACTGTCCACC ACATCGCGCA GCACGCTACG GCCACCCGCG ATCAGTCGCA GACCGCCGAT GCGCTGGCGG TCACCGGCAA GGGCGTTGTC GATCGTGTGC AGGTGTCGAT TGCCGGGCTT TCCAGCGGTG TGCAGCAGAC GGCTGAAATG ATCCAGCGCA TGGCCGAAGA CAGCCAGAAG ATCAATAGCG TGGTCAACGT GATCCACAGC ATTGCCGAGC AGACCAACCT GCTGGCCCTG AACGCCGCCA TCGAAGCCGC ACGCGCCGGG GAGATGGGTC GGGGCTTCGC GGTGGTCGCC GACGAGGTGC GCAACCTGGC CAGGCGCGTG CAGACCTCGA CCGACGAGAT CACCACGATG GTCTCGACCC TGCAAAGCGG CACCCGCGAT GCGGTGGATT TCATGCAGGA CAGCTCGTTC AAGGCCGATG AATGCGTACA ACAGGCCAGG GAAGCCGGCG AGGCCCTGGC GGCGATTGCC AGCGCGGTGG CGCAGATGCG CGAAAGCAAC ACGCAGATCG CCGTTGCAGC CCAGCAGCAG AGCCAGGTGG CAGAGGACAT GAACCGCGCC GTAGTGAGCA TCCGCGATGT CACCGAGCGC ACGGTGATTC AGACGGTGGA TTCCGCCAGC ACCAGCGACC AGCTCGCCAC ACTGGCGGGC GAGCTCAGCA GCGCCATCGG CCAGCTCAGG CTGTAA
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Protein sequence | MGSWLGNLSL KYKFWAVNAV AFFTTLLLVL FALQLEQQAR AETSRQAAQA QARLLSAWPA DKPLPSSDTL LVYTQGQAPV LNGLALPELA NGSGWVALDK PSGGQWLNGA WLAPANKGQQ LAVLAFTPTF KQILLDRFTH YAAAVFVLML LMLCASQLLI RFLLSQLNAL KDVMLHVEKS GDLSARVANR SDDEVGQMAK AFNAMQAGYQ RVVNTVSQTA SRLDEGAAHL ASGMKDVRQG MLGQQSETDQ VATAINEMTA TVHHIAQHAT ATRDQSQTAD ALAVTGKGVV DRVQVSIAGL SSGVQQTAEM IQRMAEDSQK INSVVNVIHS IAEQTNLLAL NAAIEAARAG EMGRGFAVVA DEVRNLARRV QTSTDEITTM VSTLQSGTRD AVDFMQDSSF KADECVQQAR EAGEALAAIA SAVAQMRESN TQIAVAAQQQ SQVAEDMNRA VVSIRDVTER TVIQTVDSAS TSDQLATLAG ELSSAIGQLR L
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