| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2246 |
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| Symbol | kdpE |
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| ID | 1183897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2489039 |
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| End bp | 2489731 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637393627 |
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| Product | KDP operon transcriptional regulatory protein kdpE |
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| Protein accession | NP_792067 |
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| Protein GI | 28869448 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.683582 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAGTCAGA CGGCAACCAT TCTGGTGATC GACGACGAAC CGCAGATTCG CAAATTCCTG
CGCATCAGCC TTGTCTCGCA GGGCTACAAG GTTCTGGAGG CGGCGACCGG GACCGAGGGG
CTGACCCAGG CGGCGTTGAA CAAGCCTGAC TTGCTGGTGC TGGACCTGGG GCTGCCGGAC
ATGGACGGTC AGCAGGTATT GAGCGAGTTT CGCGAGTGGT CGGCGGTGCC GGTACTGGTG
CTCTCGGTGC GCGCCAGCGA AGCGCAGAAG GTCCAGGCGC TGGACGCCGG GGCCAACGAT
TACGTGACCA AGCCTTTCGG CATTCAGGAA TTTCTGGCCA GGGTCAGGGC CTTGCTCAGG
CAGGTCTCGG GCAGCGACAA GCCCGAGTCG GCCTTGAGGT TCGGTCCGCT GACGGTGGAT
CTGGCCTATC GTCGTGTGCT GCTTGATGAT CTGGAAGTGG CATTGACTCG CAAGGAGTAC
TCGGTGCTGG CACAATTGGC CCGGTATCCG GGGCGGGTCA TCACCCAGCA GCAACTGCTC
AAGGATATCT GGGGTCCGAC CCATGCCGAA GACAGCCACT ACCTGCGCAT CGTAGTCGGG
CATTTGCGCC AGAAACTGGG CGATGACCCG ACCGCGCCGA GGTTCATCAT CACCGAGGCC
GGGATCGGCT ATCGATTGCT CGCGGACAGT TGA
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| Protein sequence | MSQTATILVI DDEPQIRKFL RISLVSQGYK VLEAATGTEG LTQAALNKPD LLVLDLGLPD
MDGQQVLSEF REWSAVPVLV LSVRASEAQK VQALDAGAND YVTKPFGIQE FLARVRALLR
QVSGSDKPES ALRFGPLTVD LAYRRVLLDD LEVALTRKEY SVLAQLARYP GRVITQQQLL
KDIWGPTHAE DSHYLRIVVG HLRQKLGDDP TAPRFIITEA GIGYRLLADS
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