Gene PSPTO_2246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2246 
SymbolkdpE 
ID1183897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp2489039 
End bp2489731 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content62% 
IMG OID637393627 
ProductKDP operon transcriptional regulatory protein kdpE 
Protein accessionNP_792067 
Protein GI28869448 
COG category[T] Signal transduction mechanisms
[K] Transcription 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.683582 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTCAGA CGGCAACCAT TCTGGTGATC GACGACGAAC CGCAGATTCG CAAATTCCTG 
CGCATCAGCC TTGTCTCGCA GGGCTACAAG GTTCTGGAGG CGGCGACCGG GACCGAGGGG
CTGACCCAGG CGGCGTTGAA CAAGCCTGAC TTGCTGGTGC TGGACCTGGG GCTGCCGGAC
ATGGACGGTC AGCAGGTATT GAGCGAGTTT CGCGAGTGGT CGGCGGTGCC GGTACTGGTG
CTCTCGGTGC GCGCCAGCGA AGCGCAGAAG GTCCAGGCGC TGGACGCCGG GGCCAACGAT
TACGTGACCA AGCCTTTCGG CATTCAGGAA TTTCTGGCCA GGGTCAGGGC CTTGCTCAGG
CAGGTCTCGG GCAGCGACAA GCCCGAGTCG GCCTTGAGGT TCGGTCCGCT GACGGTGGAT
CTGGCCTATC GTCGTGTGCT GCTTGATGAT CTGGAAGTGG CATTGACTCG CAAGGAGTAC
TCGGTGCTGG CACAATTGGC CCGGTATCCG GGGCGGGTCA TCACCCAGCA GCAACTGCTC
AAGGATATCT GGGGTCCGAC CCATGCCGAA GACAGCCACT ACCTGCGCAT CGTAGTCGGG
CATTTGCGCC AGAAACTGGG CGATGACCCG ACCGCGCCGA GGTTCATCAT CACCGAGGCC
GGGATCGGCT ATCGATTGCT CGCGGACAGT TGA
 
Protein sequence
MSQTATILVI DDEPQIRKFL RISLVSQGYK VLEAATGTEG LTQAALNKPD LLVLDLGLPD 
MDGQQVLSEF REWSAVPVLV LSVRASEAQK VQALDAGAND YVTKPFGIQE FLARVRALLR
QVSGSDKPES ALRFGPLTVD LAYRRVLLDD LEVALTRKEY SVLAQLARYP GRVITQQQLL
KDIWGPTHAE DSHYLRIVVG HLRQKLGDDP TAPRFIITEA GIGYRLLADS