| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2223 |
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| Symbol | |
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| ID | 1183874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2446626 |
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| End bp | 2447318 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637393604 |
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| Product | DNA-binding response regulator |
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| Protein accession | NP_792044 |
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| Protein GI | 28869425 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.375792 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCGGGCGC TGATCGTCGA TGACGACGTG GCCATTCGCG AACTGCTTTG CGACTACCTG
ACGCGCTTCA ACATCAATGC CCGCGGCGTG ACCGACGGTT CGCAGATGCG TCAGGCACTC
ACCGATGAAA CCTTCGATGT GGTGGTGCTC GACCTGATGC TGCCCGGCGA GGACGGCCTG
TCGCTGTGCC GCTGGTTGCG CAGCACTTCG GACATTCCGA TCCTGATGCT GACCGCACGT
TGCGAACCGA CTGACCGGAT CATCGGCCTG GAGCTGGGTG CCGACGATTA CATGGCCAAA
CCGTTCGAAC CGCGCGAGCT GGTCGCGCGC ATCCAGACCA TCCTGCGCCG GGTACGCGAC
GAACGCAGCG ATCAGCGCAC GACCATTCGC TTTGACGCCT GGCGCCTGAA CAGCGTCCTG
CGTCAATTGA CGGCCGCCGA CGGGCTGGTG GTGCCGCTGT CCAACGCCGA GTTTCGCCTG
TTGCGCGTCT TTCTCGAACG ACCGCACAGA GTCTTGAGCC GCGAACAGTT GCTCGATGCT
GCAAGAGGCC GCTCGATAGA GGCGTTTGAT CGCAGTATCG ATTTGCTGGT TTCGCGCCTG
CGCCAGAAAC TCGGCGACGA CCCGAAGAAT CCGCAACTGA TCAAGACCGT ACGCGGTGAA
GGCTATCTGT TCGATGCCAG GGAGCTGGGT TGA
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| Protein sequence | MRALIVDDDV AIRELLCDYL TRFNINARGV TDGSQMRQAL TDETFDVVVL DLMLPGEDGL
SLCRWLRSTS DIPILMLTAR CEPTDRIIGL ELGADDYMAK PFEPRELVAR IQTILRRVRD
ERSDQRTTIR FDAWRLNSVL RQLTAADGLV VPLSNAEFRL LRVFLERPHR VLSREQLLDA
ARGRSIEAFD RSIDLLVSRL RQKLGDDPKN PQLIKTVRGE GYLFDARELG
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