Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2209 |
Symbol | |
ID | 1183860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2433990 |
End bp | 2434718 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637393590 |
Product | dienelactone hydrolase family protein |
Protein accession | NP_792030 |
Protein GI | 28869411 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0412] Dienelactone hydrolase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.670258 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAGCA CTATCGAAAT CCGTTCTGTG GTCTATCAGA TTGAAGGTCA GCCTTATGAA AGCCGACTGG TGTATGACAG CAGCGCTACC GCCCTGCAGC CCGGTCTCTT GATGGCGCCT AACTGGATGG GTGTCAGTCG GGGTGCCGAG GACATTGCCA GGGCTGTGGC TGCGAAGGGC TATGTGGTGC TGCTGGCGGA TCTTTACGGT CAGCAGCTTC GCCCGAGTAA CAATGACGAG GCGGGCGCTG CCATGACGCC GCTCAAGAAC GACCGTGGCC TGCTGCGCAA GCGCATGCAG GCGGGGCTCG ACCAGTTGTT GAGTCAGGCG GATGTGTCGC TGGATGTGAG CAGAATCGCA ACGTTCGGTT TCTGCTTCGG CGGCTGCTGT TCGCTGGAGC TGGCGCGTAC CGGGGCCGAG CTGAAAGCGG CCATCTCGTT CCACGGGACG CTGGACACGC CAAACCCTGC TGATGCCAGC AACATCAAGG GCTCAGTGTT GGTCCTGCAC GGCGCTTCTG ACCCGTTGGT GCCGAAAGAG CAACTGCCTG CTTTCGAGGA AGAAATGAAC GCCGCTGGCG TGGACTGGCA ACTGCACAGC CACGGCGGTG CATTCCACTC ATTCACCGAC CCGCACGCCA ATGTGCCAGG CATGATGATG TACGACGCCA AAGTGTCGGC CCGCGCGTTC AAGTCGATGC ATGATTTGCT GAAAGAAGTG TTTGGCTGA
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Protein sequence | MSSTIEIRSV VYQIEGQPYE SRLVYDSSAT ALQPGLLMAP NWMGVSRGAE DIARAVAAKG YVVLLADLYG QQLRPSNNDE AGAAMTPLKN DRGLLRKRMQ AGLDQLLSQA DVSLDVSRIA TFGFCFGGCC SLELARTGAE LKAAISFHGT LDTPNPADAS NIKGSVLVLH GASDPLVPKE QLPAFEEEMN AAGVDWQLHS HGGAFHSFTD PHANVPGMMM YDAKVSARAF KSMHDLLKEV FG
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