| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2203 |
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| Symbol | sucD |
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| ID | 1183854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2426551 |
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| End bp | 2427432 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637393584 |
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| Product | succinyl-CoA synthase, alpha subunit |
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| Protein accession | NP_792024 |
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| Protein GI | 28869405 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0074] Succinyl-CoA synthetase, alpha subunit |
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| TIGRFAM ID | [TIGR01019] succinyl-CoA synthetase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0467601 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGTCC TGATCAATAA AGACACCAAG GTTATCTGCC AGGGTTTCAC TGGTTCGCAA
GGTACTTTCC ACTCCGAGCA AGCCATTGCC TACGGCACTA AAATGGTTGG CGGCGTGACG
CCAGGCAAGG GTGGCACTAC GCACCTGAAC CTGCCAGTGT TCAACACTGT GAAAGAAGCG
GTAGACACCA CTGGCGCTAC CGCCAGCGTT ATCTACGTTC CAGCTCCTTT CTGCAAGGAT
TCCATCCTTG AAGCAGCGTT CGGCGGCATC AAGCTGATCG TCTGCATCAC CGAAGGCATC
CCGACCATCG ACATGCTCGA AGCCAAGGTC AAGTGTGACG AACTGGGTGT GATCCTGATC
GGTCCTAACT GCCCAGGCGT CATCACTCCG GGCGAGTGCA AGATCGGCAT CATGCCAGGT
CACATTCACT TGCCAGGCAA AGTCGGCATC GTGTCGCGCT CCGGCACCCT GACTTACGAA
GCTGTGAAGC AGACCACTGA CGCCGGTTTC GGTCAGTCCA CCTGCGTCGG CATCGGCGGT
GACCCGATCC CTGGCTCGAA CTTCATCGAC ATCCTGAAAC TGTTCCAGGA AGACCCGCAG
ACCGAGGCGA TCGTCATGAT CGGCGAGATC GGCGGTTCGG CTGAAGAAGA AGCGGCTGCC
TACATCAAGG CACACGTGAC CAAGCCGGTT GTTTCCTACA TCGCTGGTGT GACTGCTCCT
CCGGGCAAGC GCATGGGCCA TGCCGGTGCA ATCATCTCGG GTGGTAAAGG TACTGCAGAC
GAGAAATTCG CTGCACTGCA GGACGCTGGC GTAAAAACCG TGCGCTCCCT GGCAGACATC
GGCAAGGCCT TGGCCGAGCT GACCGGTTGG CCGACCAAGT AA
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| Protein sequence | MSVLINKDTK VICQGFTGSQ GTFHSEQAIA YGTKMVGGVT PGKGGTTHLN LPVFNTVKEA
VDTTGATASV IYVPAPFCKD SILEAAFGGI KLIVCITEGI PTIDMLEAKV KCDELGVILI
GPNCPGVITP GECKIGIMPG HIHLPGKVGI VSRSGTLTYE AVKQTTDAGF GQSTCVGIGG
DPIPGSNFID ILKLFQEDPQ TEAIVMIGEI GGSAEEEAAA YIKAHVTKPV VSYIAGVTAP
PGKRMGHAGA IISGGKGTAD EKFAALQDAG VKTVRSLADI GKALAELTGW PTK
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