Gene PSPTO_2175 details

Gene Information

• Locus tag: PSPTO_2175
• Symbol: leuB
• ID: 1183826
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 2394942
• End bp: 2396024
• Gene Length: 1083 bp
• Protein Length: 360 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637393557
• Product: 3-isopropylmalate dehydrogenase
• Protein accession: NP_791997
• Protein GI: 28869378
• COG category: [C] Energy production and conversion; [E] Amino acid transport and metabolism
• COG ID: [COG0473] Isocitrate/isopropylmalate dehydrogenase
• TIGRFAM ID: [TIGR00169] 3-isopropylmalate dehydrogenase

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0671441
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCAAGC AGATTCTGAT TCTCCCAGGT GATGGTATTG GTCCTGAGAT CATGACCGAA 
GCGGTCAAGG TGCTGGAGCT GGCCAACCAG AAGTATCAAC TGGGTTTTGA ATTGACCCAC 
GACGTGATCG GCGGCGCGGC CATCGACAAG CACGGCGTGC CGCTGGCCGA CGAGACACTG 
GACCGCGCCC GTGCGGCCGA TGCGGTACTG CTCGGCGCGG TGGGCGGCCC GAAATGGGAC 
ACCATCGAGC GTGACATCCG TCCTGAGCGC GGCCTGCTGA AAATCCGTTC GCAACTGGGC 
CTGTTCGGCA ATCTGCGCCC GGCGATTCTC TACCCGCAAC TGGCGGACGC CTCGAGCCTC 
AAGCCGGAAA TCGTCGCGGG CCTGGACATC CTGATCGTTC GCGAACTGAC CGGTGGCATC 
TATTTTGGCG CGCCACGCGG TACTCGCGTG CTGGACAATG GCGAGCGTCA GGCGTACGAC 
ACGCTGCCGT ACAGCGAGAG CGAAATCCGT CGCATTGCCA AGGTCGGTTT TGATATGGCC 
ATGGTGCGTG GCAAAAAGCT CTGCTCGGTA GACAAGGCCA ACGTACTGGC GTCCAGCCAG 
CTGTGGCGCG AAATTGTCGA GCAGGTCGCC AAGGATTACC CGGAAGTCGA ACTGAGCCAC 
CTGTACGTCG ATAACGCCGC CATGCAACTG GTGCGTGCGC CCAAGCAGTT CGACGTGATC 
GTGACCGACA ATCTGTTTGG CGACATTCTG TCCGATCAAG CGTCGATGCT CACCGGTTCC 
ATCGGCATGC TGCCGTCGGC TTCGCTGGAC ACCGCCAACA AGGGCATGTA TGAGCCTTGC 
CACGGTTCGG CTCCGGACAT CGCCGGCCAA GGCATTGCCA ACCCGCTGGC CACCATTCTG 
TCGGTGTCGA TGATGCTACG TTACAGCTTC AACCTGACCG CCGCTGCCGA CGCCATCGAA 
CAGGCCGTCA GCCTGGTGCT GGATCAGGGT ATCCGCACCG GCGACATCTG GTCCGAGGGC 
AAAGTCAAAG TCGGTACCAA GGAAATGGGC GATGCAGTAG TCGCCGCGCT ACGGAATCTG 
TAA 

 

Protein sequence

MSKQILILPG DGIGPEIMTE AVKVLELANQ KYQLGFELTH DVIGGAAIDK HGVPLADETL 
DRARAADAVL LGAVGGPKWD TIERDIRPER GLLKIRSQLG LFGNLRPAIL YPQLADASSL 
KPEIVAGLDI LIVRELTGGI YFGAPRGTRV LDNGERQAYD TLPYSESEIR RIAKVGFDMA 
MVRGKKLCSV DKANVLASSQ LWREIVEQVA KDYPEVELSH LYVDNAAMQL VRAPKQFDVI 
VTDNLFGDIL SDQASMLTGS IGMLPSASLD TANKGMYEPC HGSAPDIAGQ GIANPLATIL 
SVSMMLRYSF NLTAAADAIE QAVSLVLDQG IRTGDIWSEG KVKVGTKEMG DAVVAALRNL