Gene PSPTO_2163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2163 
SymbolaspC 
ID1183810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp2377145 
End bp2378341 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content62% 
IMG OID637393541 
Productaspartate aminotransferase 
Protein accessionNP_791985 
Protein GI28869366 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1448] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.424258 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTGT TCTCCGCTGT CGAAATGGCA CCCCGCGATC CGATCCTGGG TATCAACGAA 
GCCTTCAACG CCGACACCCG TACCACCAAG GTCAACCTTG GCGTGGGCGT CTACTGTGAT
GAAGACGGGC GCATTCCTCT GCTGCGTGCC GTGGCTGAAG CTGAAAAGAT TCGTGTCGCC
CAGCACGCGC CGCGCGGCTA CCTGCCGATC GACGGCATTG CCGCCTACGA CCAGGCCGTG
CAAAAACTGT TGCTGGGTGC CGATTCACCG CTGATCGCCT CGGGCCGGGT GCTAACCACT
CAATCGGTGG GCGGCACGGG TGCTTTGAAG ATCGGTGCCG ACTTCCTCAA GCAACTGCTG
CCCAATGCGG TGGTGGCCAT CAGCGACCCA AGCTGGGAAA ACCATCGCGC GCTGTTCGAA
ACCGCCGGTT TCCCGGTGCA GAACTATCGT TACTACGACG CCGCCACGCA TGACGTGAAC
CGCGCCGGCA TGCTCGAAGA CCTGCACAAC CTGCCGAACA ACTCGGTGGT GGTGCTGCAC
GCCTGCTGCC ACAACCCGAC TGGCGTCGAT CTGAGCCTGG ACGACTGGAA AAAAGTGCTG
GAAGTGGTCA AGGCCAAGGG CCACGTACCG TTTCTGGACA TGGCTTACCA GGGCTTTGGC
CAAGGCATTC AGGAAGACGC GCTGGCGGTG CGCCTGTTCG CCGAGTCGGG CCTGACCTTC
TTCGCTTCCA GCTCGTTCTC CAAATCGCTG TCGCTGTATG GCGAGCGCGT CGGTGCGCTG
TCGATCATCA CAGAATCCAA GGAAGAAACC GCCCGCGTTC TGTCGCAGGT CAAGCGTGTG
ATCCGCACCA ACTACTCCAA CCCGCCGACC CACGGCGCGA TCATTTCCGC CGCCGTCCTC
AACGACCCGG CCCTGCGCGC GATGTGGGAA GAAGAACTCG GCGAGATGCG CGTGCGCATT
CAGGGCATGC GCAAGGCGAT GGTCGAGCGT CTGGCCGACA ACCCGGCCGG CCAGGATTTC
AGCTTCGTCG GCCGTCAGTG CGGCATGTTC TCCTACTCCG GCCTGACCGC CGCCCAGGCC
CAGCGCCTAC GCAGTGAATT CGGCATCTAC GCGCTGGACA CCGGCCGTAT CTGCGTGGCC
GCGCTGAATC AGAAAAATAT CGATGCGGTG TGTGAGGCGA TCAAGAAGGT TCTTTAA
 
Protein sequence
MSLFSAVEMA PRDPILGINE AFNADTRTTK VNLGVGVYCD EDGRIPLLRA VAEAEKIRVA 
QHAPRGYLPI DGIAAYDQAV QKLLLGADSP LIASGRVLTT QSVGGTGALK IGADFLKQLL
PNAVVAISDP SWENHRALFE TAGFPVQNYR YYDAATHDVN RAGMLEDLHN LPNNSVVVLH
ACCHNPTGVD LSLDDWKKVL EVVKAKGHVP FLDMAYQGFG QGIQEDALAV RLFAESGLTF
FASSSFSKSL SLYGERVGAL SIITESKEET ARVLSQVKRV IRTNYSNPPT HGAIISAAVL
NDPALRAMWE EELGEMRVRI QGMRKAMVER LADNPAGQDF SFVGRQCGMF SYSGLTAAQA
QRLRSEFGIY ALDTGRICVA ALNQKNIDAV CEAIKKVL