| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2156 |
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| Symbol | |
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| ID | 1183803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2366294 |
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| End bp | 2367637 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637393534 |
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| Product | renal dipeptidase family protein |
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| Protein accession | NP_791978 |
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| Protein GI | 28869359 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2355] Zn-dependent dipeptidase, microsomal dipeptidase homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0303403 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAGAC CGCGTTGGAA AAAGGCTCTC TTCATCGGCC TGCCGCTGGC TCTGGCCATT
AGTGCAGGCG CGGGTTTTCT GGCCTGGAAT TACGGCTTGC CCGCCAGTTA CCCGGTCAAG
GTCATGAAGC AGGCCGACGA CCTGCAAGAG CGGATCATTT CCTTCGACAG CCACATCACC
GTGCCGATGA AATTCGGCAG TGAGGGCAAC GAGGCCGACA AGGACGGTTC GGGGCAGTTC
GACCTGGTGA AAACCGCCCG CGGCAGGCTC TCCGGCGCGG CGTTGACGAT TTTTGGCTGG
CCGGAAATCT GGAACGGCGA CAACGCCCCG CATCGTCCGA CCCCTGGTTT TGTTGACGAA
GCACGCCACC AGCAGGAAGT GCGCTACAAA ATCATCACCG GCCTGGTTCG CGATTTTCCC
CATCAGGTCG GCATTGCCTA CACCCCGGAC GACATGCGCC GCCTGCACGG CGAGGGCAAG
TTTGCGATCT TCATCAGCAT GCTCAACGCC TACCCGCTGG GCGACGACCT GAACCTGCTG
GACCACTGGA CCGCGCGCGG CATGCGCATG TTCGGTTTCA GCTACGTGGG CAATAACAGC
TGGGCGGATT CTTCACGCCC CCTGCCCTTT CTCAACGACA CGCCCGACGC GCTGGGCGGC
CTGTCAGAGA TCGGCAAGCA GGCGGTGCAG CGCCTCAATG ACCTGGGCGT GATCATCGAC
GTGTCGCAGA TGTCCAGCAA GGCGCTGCTG CAGGTCAGCC AGCTGAGCCG CACGCCGATG
GTCGCCTCGC ACTCGGCACC GCGCGCGCTG GTGGACATCC CGCGCAACCT CAGCGACGAG
GAACTGCAGC TCATCAAACA GAGCGGCGGT GTGGTGCAGA TCGTGGCGTT TCCGGCCTAT
TTGAAGCCAC TGACCCAGAA AACCCAGGAC AAGCTCAACG CCCTGCGCAA GGATTTCGAC
CTGCCGCCAT TGCCGAACCT GGCGATGGCG CTGATGCCGG GCGATCCGAT CATCACCGTC
TGGCCCGAAC AGCGTTTCGG TGCCTACGCC AGCAAGCTGT ACGCGATTCT TGAGGAAGAA
CCCAAGGCCA CGGTCAAGGA TTTCGTCGAC GCCATCGACT ACACCGTCAG GAAGATCGGT
ATCGACCATG TCGGCATCAG TTCCGACTTC AACGATGGCG GCGGCGTGAA AGGCTTTAAC
GACGTCAGTG AGGTCCGCAA CGTGACCGCC GAGCTGATCG AACGCGGTTA CGCCGAAGCC
GACATCACCA AACTCTGGGG CGGCAACTTC CTGCGCGTCT GGGAACAGGT TCAGGCCTCG
GCGCGCCCGG CGGCCAAACC ATGA
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| Protein sequence | MTRPRWKKAL FIGLPLALAI SAGAGFLAWN YGLPASYPVK VMKQADDLQE RIISFDSHIT
VPMKFGSEGN EADKDGSGQF DLVKTARGRL SGAALTIFGW PEIWNGDNAP HRPTPGFVDE
ARHQQEVRYK IITGLVRDFP HQVGIAYTPD DMRRLHGEGK FAIFISMLNA YPLGDDLNLL
DHWTARGMRM FGFSYVGNNS WADSSRPLPF LNDTPDALGG LSEIGKQAVQ RLNDLGVIID
VSQMSSKALL QVSQLSRTPM VASHSAPRAL VDIPRNLSDE ELQLIKQSGG VVQIVAFPAY
LKPLTQKTQD KLNALRKDFD LPPLPNLAMA LMPGDPIITV WPEQRFGAYA SKLYAILEEE
PKATVKDFVD AIDYTVRKIG IDHVGISSDF NDGGGVKGFN DVSEVRNVTA ELIERGYAEA
DITKLWGGNF LRVWEQVQAS ARPAAKP
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