| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2155 |
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| Symbol | |
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| ID | 1183802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2364968 |
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| End bp | 2366251 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637393533 |
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| Product | aminotransferase, class V |
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| Protein accession | NP_791977 |
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| Protein GI | 28869358 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0697123 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGACC GCAGAACCTT TCTCAAGCAG GCCGGGGTAC TGGCTGCCGC CCTGCCACTG
GGCTCCAGCC TGGCAACAGC AGCCGAACCA ATAACAGCGC CCGAGCCAAT AGCCACAGAC
AAATGGACAC GCCTCAAACA GCTGTTCAAT CAGGACCCGG ATTACGTCCA CTTTTCCAAC
TTTCTGGTCA CCTCGCACCC CAAACCGGTG CGCGACGCCA TTGAGCAGCA TCGTGCACAC
ATCGACCGCA ATCCTGGCCT GGCCATGGAT TGGGACCTGC AGGAAACCGA GCGCCGCGAA
CATGACGTTC GCGTCTGGGC TGGCAAGTAC CTGAATGCCC AACCCGGCCA GATCGCCCTG
ACCGGCAGCA CCACCGAAGG GCTGGCGATG ATCTACGGCG GCCTGCATGT GCGCCCGGAC
CAGGAAATCC TCACCACCGA ACACGAACAC TCTTGCACCC GTGACATCCT CAAGTTTCGG
CAGCAGCGCG AAGGCACACA GGTGCGCAAG ATTCGCCTGT TCAAGGACTC GGCCACTGTT
TCGGCAGACG AGATCATCGG CTCCATCGCC CGCAGCATTC AGCCGAAGAC GCGCGTGCTG
GGCATGACCT GGGTGCAGTC GGGCAGCGGC GTGAAGCTGC CTATCGGGGC CATCGGTGAC
CTGGTCGAAG AACACAACCG CAACCGCGAC GACAAAGACC GCATTTTATA TGTGGTCGAT
GGCGTGCACG GGTTTGGCGT CGAGAACCTG GATTTTCCGG ACATGAACTG CGACTTCTAC
GTCGCGGGCA CCCACAAGTG GATGTTTGGC CCGCGCGGCA CCGGCATCGT GTGCGCGCGC
TCGGAGCAGG TGAAGGACCT CACGCCGTTG ATCCCGACGT TCTCGGAAGC GACCAACTTC
GGCACGATCA TGACGCCAGG CGGCTATCAC TCGTTCGAGC ATCGCTGGGC GCTGAACGAA
GCGTTCAAGC TGCACCTGCA ACTGGGCAAG GCCGAGGTGC AGTCGCGCAT TCACGAGCTC
AACAGCTACC TCAAGCAACG TCTTCATGCA CAGCCCAATG TCGAGCTGGT GACGCCGATG
GACCCTGCGC TGTCTGCGGG TTTCAGTTTT TTCCGGCTCA AGGGCCAGGA AAGTGACGAA
GTGGCCGCGT GGCTGATGAA ACAACACATG GTGGTCGATG CGGTGAGCCG CGACGTCGGC
CCGGTGGTGC GCACTGCACC GGGGCTGCTG AACAACGAAG CCGAGATCGA CCGCTTCATG
GCCCTGCTCG GCCAGCGCGC CTGA
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| Protein sequence | MTDRRTFLKQ AGVLAAALPL GSSLATAAEP ITAPEPIATD KWTRLKQLFN QDPDYVHFSN
FLVTSHPKPV RDAIEQHRAH IDRNPGLAMD WDLQETERRE HDVRVWAGKY LNAQPGQIAL
TGSTTEGLAM IYGGLHVRPD QEILTTEHEH SCTRDILKFR QQREGTQVRK IRLFKDSATV
SADEIIGSIA RSIQPKTRVL GMTWVQSGSG VKLPIGAIGD LVEEHNRNRD DKDRILYVVD
GVHGFGVENL DFPDMNCDFY VAGTHKWMFG PRGTGIVCAR SEQVKDLTPL IPTFSEATNF
GTIMTPGGYH SFEHRWALNE AFKLHLQLGK AEVQSRIHEL NSYLKQRLHA QPNVELVTPM
DPALSAGFSF FRLKGQESDE VAAWLMKQHM VVDAVSRDVG PVVRTAPGLL NNEAEIDRFM
ALLGQRA
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