| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2149 |
|---|
| Symbol | |
|---|
| ID | 1183796 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 2341852 |
|---|
| End bp | 2348307 |
|---|
| Gene Length | 6456 bp |
|---|
| Protein Length | 2151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637393527 |
|---|
| Product | pyoverdine sidechain peptide synthetase III, L-Thr-L-Ser component |
|---|
| Protein accession | NP_791971 |
|---|
| Protein GI | 28869352 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1020] Non-ribosomal peptide synthetase modules and related proteins |
|---|
| TIGRFAM ID | [TIGR01733] amino acid adenylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAACAGT TGCTTGACTC CGTTAAATCG CTGTCCGCCC GTGAACGCAA GGCGCTGGCG
ATCCTGCTCA AGCGCCAGGG GGTGAATCTC TACGGGGTCA CGCCGATTGC CAGACGAGAG
ACGCCGGCAG CGTCTGCGCT GTCGTATGCG CAGCAGCGGC AATGGATCAT CTGGCAACTG
GAACCGCACA GCGCGGCCTA CAACATTCCG CTGGCGCTGC GCCTGCATGG CGCGCTGGAT
GTCGAGGCGT TGCGGCGCAG CGTTGAACAG CTGATCGAGC GTCACGAAAC CCTGCGCACC
ACGTTTGAAC AGCAGGGCGA CGAGGCGTTG CAGGTGGTGC ATCCCGCGTC GCCGTTTGCG
CTCAACGTTG ATCAACTGGC GCTGGGCGAA ACGGTCGAAA GCTATGTTGA TCTGGAAGTA
CAGCGGCCTT TCGATCTGCA ACATGGGCCG CTGTTGCGGG TCAGGCTGCT TGAACTGAGC
GAACAGGAAC ACGTGCTGGT GCTGACCCAG CACCACATCG TCTCCGATGG CTGGTCGATG
CCGATCATGG TTGACGAGCT GATGCAGTGC TATCAGGCCG CCTCGCTGGG TCGCGAGGCC
GAACTGGCCC AACTGCCAAT CCAGTACGCC GACTACGCGA TCTGGCAGCG TAACTGGCTG
GAGATGGGCG AGCAGGAACG CCAACTGGCT TACTGGACGC AGCAACTGGG CGATCAGCAG
CCGATTCTTG AATTACCCAC CGATCGACCG CGCCCGGCGC TGCGCAGCTA CGACGGCGCG
CGACTGAACA TCGAACTGGA CGCCGCGCTT TTGAACACCC TCAAGGCACT GGCGCGGCAG
CAGGGCATCA CCCTGTTCAT GCTGTTGCTG GCGTCGTTGC AGACCTTGCT GCACCGCTAC
AGCGGTCAGG CCGACATACG CGTTGGCGTA CCCGTCGCCA ACCGCACCCG CAGCGAAACC
CAAGGGCTGA TCGGCTTCTT CGTCAATACC CAGGTGCTCA AGGCCGAGTT CGGCGCGCAG
ACCACCGTGG CCGACCTGCT GCAACAGATC AAACAGACTG CCGTGCAGGC CCAGGCCCAT
CAGGACCTGC CGTTCGAGCA ACTGGTCGAA GCCTTGCAGC CGCAGCGCGA CCTGAGCCGC
AGCCCGCTGT TTCAAGTGGC CTACAACCAC CAGAGCGAAG GCTACAACGA AGCCCGCGAG
CTGGCCGGTC TGCGCCTGGA GTATCAGGTG TCGGACAAGC ACACCGCGCA GTTCGACCTG
ACCCTGGACA CTTGCGAACG CCAGAACGGC CTGGCTGCCT CGCTGACCTA CGCCACCGAC
CTGTTCGACG CCACAACCAT CGAGCGCATG GCCGGGCACT GGCGCAACCT GCTGAGCGGC
ATGTGCCGCG ACGCCAATCA GCGCATCGCC GACTTGCCAT TGCTGAGCGT TGAAGAGCGG
CAGAATACCC TGCGCGACTG GAACCACAAG CTTGCGGTTT ACCCGACTGA GCAGTGCGCC
CATCAACGCA TCGAAACCCA GGCAGAACGC ACCCCGCAGG CCATTGCCCT GAGCTTGGGT
GCCGAGCAAT TGAGCTACCA GCAACTCAAC AGCCGCGCCA ACCAGTTGGC CCACAAACTG
CGCGAGCAGG GCGTCGGCCC GGATGTTCGC GTGGGGCTTG CGGCTGAGCG CAGCCTGGAG
ATGATCGTGG GGATGCTGGC GATCCTCAAG GCCGGGGGCG CGTACGTGCC GCTGGACCCG
GATTACCCGC AGGATCGCTT GAGCTTCCTG ATGCAGGACA GCGGTATCGA ATTGTTGCTG
ACCCAAACGC AGTTGCTGGG TCAGTTGCCG ATTCCTGCAC ACGTTCAGAC GCTGGATCTG
GCGGATGCGC TAGATGGCTA CAGCACCGAA AACCCGATCA ACCAGACCTC GCCAGACAAT
CTGGCCTACG TGATTTACAC CTCAGGTTCG ACCGGCAAAC CCAAAGGCAC CTTGCTGGCT
CATCACAACC TGATGCGCCT GTTCGCGGCT ACGGACGACT GGTTCAAGTT CAACGAAAAA
GACGTCTGGA CGCTGTTCCA TTCCTTCGCA TTCGACTTCT CGGTCTGGGA GATTTTCGGC
GCGCTGCTGC ACGGTGGCCG ACTGGTCATC GTGCCTCGCG AGGTAACCCG TTCGCCGGAA
GAGTTCCATG CGCTGCTGGT TGACCAGCAG GTCACGGTGC TTAACCAGAC GCCATCCGCC
TTCAAGCAAT TGATGCGCGT GGCTTGTGAT TCGCCTGTGC CGATGTCGTT ACAAAAAGTC
ATCTTCGGCG GCGAAGCGCT GGACGTCGCC AGCCTCAAGC CGTGGTTCGC ACGCTTCGGC
GATCAGATGC CACGACTGAT CAACATGTAC GGCATTACCG AAACTACCGT GCATGTGACC
TACAGGCCCA TCACCCTGGC CGATACGCAC AACCCGGCCA GCCCGATTGG CGAGGCGATT
GCGGACCTGT CGTGGTACGT GCTGGACGCC GATTTCAACC CGGTCGCCCA GGGTTGCAGC
GGCGAACTGC ACATTGGCCA TGCCGGTCTG GCGCGGGGTT ATCACCACCG TGCTGCACTG
ACCGCTGAGC GCTTTGTGCC AGATCCGTTC TCCAACGACG GCGGCCGTTT GTATCGCACC
GGCGATCTGG CCCGTTATAA AACCGCAGGA ACCATCGAAT ACGCCGGGCG TATCGACCAT
CAAGTGAAAA TCCGTGGCTT CCGCATCGAA CTGGGCGAAA TCGAAGCGCG GCTGCAAGCG
CATTCGGCTG TGCGCGAAGT GATTGTGCTG GCCGTGGACG GGCAACTGGC GGCGTATCTG
CTGCCGGCTC AGCCTGACCA GGATCAACAA GCGCTACGTG AAACCCTGAA AGCCGAGCTC
CGTGCGAACC TGCCGGATTA CATGGTGCCG ACCCACTTTA TCTTCCTCGA CAAGCTGCCG
CTGACCGCCA ACGGCAAGCT GGACCGCAAG GCGCTGCCAG CGCCGGACGC GAGCCAGTTG
CAGGCGGCCT ACGTCGCGCC GCAAGGTGAA TTGGAGCAGC AGTTGGCAGC TATCTGGGCC
GATGTGCTGA AAGTCGGGCA GGTCGGTCGC AGCGACAATT TCTTCGAACT CGGCGGCCAT
TCGTTGCTGG CCACGCAGGT GATCTCGCGT ATTCGTCAGC AACTGGATGT TGAACTCTCG
TTACGCGACC TGTTTGAAGC CCGCGATCTG GCAGCCTTTG CCCAAGCGGC GGGCGCAGGG
CAGGGCAATG ACGCGCCACG CTTCATCAAG GCCGACCGCA ACCAGCCGCT GGGCTTGTCT
TACGCGCAGC AGCGTCAGTG GTTTCTCTGG CAGCTCGACC CTGAAAGCAC CGCTTACACG
ATTCCTGCAG CCCTGCGCCT GAGCGGCTCG CTGGACATCG CGGCGCTGGA GCACAGCTTC
AGCGCGCTGA TCGCCCGTCA CGAAACCCTG CGCACCACCT TCCGCCAGCA GGGCGAACAG
GCGGTGCAGA TCATTCATGC GCCGCGTGCC CTGACCCTGA CGGTTGAATC CGTGCCCGCC
GGGCAGACCC TTGAGGCCTG TGTGGAGCAG GAAATGCAGC GCCCGTTCGA TCTGGAACAG
GGTCCGCTGC TGCGCGTTCG CCTGCTGAAT CTGGCCGCCG ATGAACACGT GCTGATCCTG
ACCCAGCACC ACATCGTCTC CGATGGCTGG TCGATGCCGA TCATGGTCGA TGAACTGGTG
CGCCTGTACG AAGGCTACAG CCAGGGCCGC GAGGTGCTGC TCGCTGAACT GGACATGCAG
TACGCCGACT ATGCGCTGTG GCAACGCAGC TGGATGGACG CCGGTGAGCA GGCACGGCAA
CTGGCGTACT GGAAGCAGCA ACTGGGCGAC CAGCAGCCGA TTCTGGAGCT GCCTGCCGAT
CATCCACGCC CGGTCGTGCA AAGCCACGTC GGTGCGCGGC TGGCGGTCGA ACTGGCGCCA
GCGTTGATCG ACGACTTGAA ACAGGTCGCG CGGCAACAGG GTGTCACACT GTTCATGCTG
TTGCTGGCGT CGTTTCAGAC CTTGCTGCAT CGCCACAGCG GCCAGCTGGA CATTCGTGTC
GGTGTGCCGA TTGCCAACCG CACCCGCGCG GAAACCGAAG GCTTGATCGG CTTTTTCGTC
AACACCCAAG TGCTGCGCGC CGAATTTGAC TTGCACACAA CCTTCAGCGA ACTGCTGCAA
CAGGTCAAAC ACACCGCGCT GCAAGCCCAG GCGCATCAGG AGCTGCCGTT CGAACAACTG
GTCGAAGCCT TGCAGCCACA ACGCAGCCTC AGCCACAGCC CGCTGTTTCA GGTGATGTTC
AACCACCAGA GCCAGGCCAG CGCCGAAGTG CGCGCGTTGC CCGGTTTGCA GGTTGAAGCG
CTGGTGTCGG AGAGCTACCC GGCGCAGTTC GACCTGACCC TGAACACCGC CGAACAGAAC
GGCGGCCTGA GCGCAGCCCT GACCTACGCC ACCGCGCTGT TCGAGCGCAG CACTATTGAA
CGCATGGCCG GGCACTGGCT CGCGTTGCTG CAGGCCATTT GCGCCAATGC CGGTCAGCGC
ATCGCTGATG TGCCGATGCT TGACGCTGCC GAACAGCAGC AGATCGTACG TGAGTGGAAC
GCCACGGCTG CGCAATTCCC GAGTGAGCTT TGCCTGCACA GCCTGATCGA AGCCCAAGTG
CTGGCCACGC CAAATGCCCC GGCGCTGATC TTTGCGGACG AACAACTGAG CTACACGCAA
CTCAATGCCC GCGCCAACCA GCTTGCGCAT CGCCTGCGTG AAGCGGGCGT CGGGCCGGAC
GTGCTGGTGG GGATTTGCGT TGAGCGCAGC CTGGAACTGG TCATCGGCCT GCTGGCGATC
ATCAAGGCTG GTGGCGCGTA CGTGCCGCTG GACCCGGATT ACCCCGAGGA TCGGCTGGCG
TACATGATGC AGGACAGCGG CATTGGTTTG CTGTTGACCC AGACGTCGTT GCTGGAGCGC
TTGCCGGTTC AGGTGCAGAG CATGTGTCTG GATCAGGACG GCGACTGGCT TGAAGGTTAC
AGCACTGCCA ACCCGGTCAA CCTCAGTCAT CCGCAGAACC TGGCCTACGT CATTTACACC
TCCGGTTCGA CCGGCAAGCC CAAGGGCGCA GGCAACAGCC ATCGCGCCCT GGTCAACCGA
CTGCACTGGA TGCAAAAGGC CTATGCGCTG GATGACAGCG ATACGGTGTT GCAGAAAACC
CCGTTCAGTT TCGATGTATC GGTCTGGGAG TTCTTCTGGC CGCTCCTGAC CGGCGCACGC
CTGGCCGTGG CGTTGCCGGG CGATCATCGC GACCCCGAGC GGCTGGTGCA AACTATCCGC
CAACATGAGG TCACCACCCT GCATTTTGTG CCGTCGATGC TGCAGGCGTT TATGACTCAC
CCGCAGGTAG AAAGCTGTAA CAGCCTGAGT CGTGTGATGT GCAGCGGTGA AGCATTGCCT
GCCGAACTGG TCGGCCAGGT GCTCAAGCGT CTGCCGCAGG TCGGCTTGTT CAACCTGTAC
GGACCGACCG AAGCCGCTAT CGACGTGACC CACTGGACCT GCACCACGGA CGACGTGCTC
AGCGTGCCGA TTGGTCGCCC TATCGACAAC CTGAAAACCC ATATCCTCGA CGACGGTTTG
CTGCCTGCCG CGCAAGGCGT TGCGGCAGAG CTGTATCTGG GCGGCGTGGG TCTGGCGCGG
GGTTATCACA ACCGTGCGGC GCTGACCGCC GAGCGTTTTG TGCCCGATCC GTTTGACGGG
CAGGGCGGGC GTCTTTATCG CACTGGCGAT CTGGCGCGTT ATCGCGACGA GGGCGTGATC
GAATACGCCG GGCGCATCGA CCATCAAGTG AAGATTCGCG GCCTGCGCAT CGAACTGGGC
GAAATCGAAG CCTGCCTGCT GGAACACGAC AGCGTTCAGG AAGCGGTGGT CATCGACGTT
GATGGTCCGT CCGGCAAGCA ACTGGCGGCG TATCTGGTGG TTGAACAGCG CAGCGATCAC
CTGCGTGAGC TGTTAAAGGC GCATCTGAAA GCGTCGCTGC CGGATTACAT GGTGCCCACG
CACTTCATCG TGCTGGACAG CATGCCGCTG ACCGCCAATG GCAAGCTGGA TCGTCGGGCG
CTGCCCGCGC CGGACGCCAC TCAATTGCAG CGCCAGTACG TCGCGCCGGT CAGCGAACAG
GAGCAGCAGA TGGCGGCGAT CTGGGCCGAT GTATTGAAGG TTGAACGGGT CGGGCTGAGC
GATGACTTTT TCGAGCTGGG CGGCCATTCG CTGCTGGCCA CGCAACTGAT TTCCAGAATC
CACACGGGCC TTGGGATCGA CATCCCGCTG CGCCTGATTT TCGAGAAACC GCAATTGAAC
GAATTTATTC AGGCCTTCGC CAGCAGTGGC CTGTCGCTGA CCGAGGACGG CTTGTCCGAT
ATCGAAAAAA TGATGAATGA AATGGCGGGT ATCTGA
|
|---|
| Protein sequence | MQQLLDSVKS LSARERKALA ILLKRQGVNL YGVTPIARRE TPAASALSYA QQRQWIIWQL
EPHSAAYNIP LALRLHGALD VEALRRSVEQ LIERHETLRT TFEQQGDEAL QVVHPASPFA
LNVDQLALGE TVESYVDLEV QRPFDLQHGP LLRVRLLELS EQEHVLVLTQ HHIVSDGWSM
PIMVDELMQC YQAASLGREA ELAQLPIQYA DYAIWQRNWL EMGEQERQLA YWTQQLGDQQ
PILELPTDRP RPALRSYDGA RLNIELDAAL LNTLKALARQ QGITLFMLLL ASLQTLLHRY
SGQADIRVGV PVANRTRSET QGLIGFFVNT QVLKAEFGAQ TTVADLLQQI KQTAVQAQAH
QDLPFEQLVE ALQPQRDLSR SPLFQVAYNH QSEGYNEARE LAGLRLEYQV SDKHTAQFDL
TLDTCERQNG LAASLTYATD LFDATTIERM AGHWRNLLSG MCRDANQRIA DLPLLSVEER
QNTLRDWNHK LAVYPTEQCA HQRIETQAER TPQAIALSLG AEQLSYQQLN SRANQLAHKL
REQGVGPDVR VGLAAERSLE MIVGMLAILK AGGAYVPLDP DYPQDRLSFL MQDSGIELLL
TQTQLLGQLP IPAHVQTLDL ADALDGYSTE NPINQTSPDN LAYVIYTSGS TGKPKGTLLA
HHNLMRLFAA TDDWFKFNEK DVWTLFHSFA FDFSVWEIFG ALLHGGRLVI VPREVTRSPE
EFHALLVDQQ VTVLNQTPSA FKQLMRVACD SPVPMSLQKV IFGGEALDVA SLKPWFARFG
DQMPRLINMY GITETTVHVT YRPITLADTH NPASPIGEAI ADLSWYVLDA DFNPVAQGCS
GELHIGHAGL ARGYHHRAAL TAERFVPDPF SNDGGRLYRT GDLARYKTAG TIEYAGRIDH
QVKIRGFRIE LGEIEARLQA HSAVREVIVL AVDGQLAAYL LPAQPDQDQQ ALRETLKAEL
RANLPDYMVP THFIFLDKLP LTANGKLDRK ALPAPDASQL QAAYVAPQGE LEQQLAAIWA
DVLKVGQVGR SDNFFELGGH SLLATQVISR IRQQLDVELS LRDLFEARDL AAFAQAAGAG
QGNDAPRFIK ADRNQPLGLS YAQQRQWFLW QLDPESTAYT IPAALRLSGS LDIAALEHSF
SALIARHETL RTTFRQQGEQ AVQIIHAPRA LTLTVESVPA GQTLEACVEQ EMQRPFDLEQ
GPLLRVRLLN LAADEHVLIL TQHHIVSDGW SMPIMVDELV RLYEGYSQGR EVLLAELDMQ
YADYALWQRS WMDAGEQARQ LAYWKQQLGD QQPILELPAD HPRPVVQSHV GARLAVELAP
ALIDDLKQVA RQQGVTLFML LLASFQTLLH RHSGQLDIRV GVPIANRTRA ETEGLIGFFV
NTQVLRAEFD LHTTFSELLQ QVKHTALQAQ AHQELPFEQL VEALQPQRSL SHSPLFQVMF
NHQSQASAEV RALPGLQVEA LVSESYPAQF DLTLNTAEQN GGLSAALTYA TALFERSTIE
RMAGHWLALL QAICANAGQR IADVPMLDAA EQQQIVREWN ATAAQFPSEL CLHSLIEAQV
LATPNAPALI FADEQLSYTQ LNARANQLAH RLREAGVGPD VLVGICVERS LELVIGLLAI
IKAGGAYVPL DPDYPEDRLA YMMQDSGIGL LLTQTSLLER LPVQVQSMCL DQDGDWLEGY
STANPVNLSH PQNLAYVIYT SGSTGKPKGA GNSHRALVNR LHWMQKAYAL DDSDTVLQKT
PFSFDVSVWE FFWPLLTGAR LAVALPGDHR DPERLVQTIR QHEVTTLHFV PSMLQAFMTH
PQVESCNSLS RVMCSGEALP AELVGQVLKR LPQVGLFNLY GPTEAAIDVT HWTCTTDDVL
SVPIGRPIDN LKTHILDDGL LPAAQGVAAE LYLGGVGLAR GYHNRAALTA ERFVPDPFDG
QGGRLYRTGD LARYRDEGVI EYAGRIDHQV KIRGLRIELG EIEACLLEHD SVQEAVVIDV
DGPSGKQLAA YLVVEQRSDH LRELLKAHLK ASLPDYMVPT HFIVLDSMPL TANGKLDRRA
LPAPDATQLQ RQYVAPVSEQ EQQMAAIWAD VLKVERVGLS DDFFELGGHS LLATQLISRI
HTGLGIDIPL RLIFEKPQLN EFIQAFASSG LSLTEDGLSD IEKMMNEMAG I
|
|---|
| |