| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2146 |
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| Symbol | |
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| ID | 1183793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2329386 |
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| End bp | 2330363 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637393524 |
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| Product | pyoverdine biosynthesis regulatory gene, putative |
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| Protein accession | NP_791968 |
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| Protein GI | 28869349 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2175] Probable taurine catabolism dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCATG CGTTGAGTTT GGATATCCGG CCGCTGCTGG CGGGGGCGGG CACGTTGCCC
ATGCTGGTGC AGGCGCCCGA GCCAGGTCTG GACTTGATGG AAGCGCTGGG TGAGCTAAAG
CCGCTGGTGG CCGAGCACCT GTACAGCGCG GGTGGCATCC TGTTTCGCGG TTTCGAGGTT
GGCGGCGCCG AGGCGTTTCG TGAGTTCGCG GCCGGTTTCG GCGATCCGCT GCTCAATTAT
GAGTTTGGCT CCACGCCGCG CAGCAACGTG ACCAAAGGGG TGTACACCTC GACCGAATAC
CCGGCGCACC AGAGCATCCC GCTGCACAAC GAACAGGCTT ACACGCTGGA CTGGCCGATG
AAAATCTGGT TCTACAGCAT GATCGCGGCG CAGACCGGCG GCGAAACGCC GATTGCCGAC
AGTCGCGAGA TCTACCGACG CATTCCGGCG CGCATTCGTG ATCGCTTCAT TGAAAAAAAG
CTCATGTACG TGCGCAACTA CGGCAACGGG CTGGATGTGG AATGGAGCCA GGTGTTCAAC
ACCGAAGATG AACGTGTAGT CGAAGCGTAT TGCCAGGCAC ACAACATCGA ATGCGAATGG
AAAGACGACG GGGAACTGCG CACCCGGCAA ATCTGCCAGG CAGTGTCCCG CCATCCGGTG
ACCCAGGACA CGGTCTGGTT CAACCAGGCG CACCTGTTCC ACATCTCCAA CCTGCAACCG
GAAGTGCGCG AAACCCTGCT GGACGTTGTG GATGAAGAAG ACCTGCCGCG CAACGTCTAC
TACGGCGATG GCTCGCCCAT CGAAGAAACC CTGCTGGACG AGATTCGCGG CGTACTCGAC
GACTGCACCG TCAGCTTCCC GTGGCTGGAA AACGACGTGC TGATGCTCGA CAACATGCTC
ACCGCCCACT CCCGAGCGCC GTTCACCGGC AAGCGCAAAG TCGTGGTGGC CATGGCGCAG
GGGCATTCGG ATAAGTAA
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| Protein sequence | MSHALSLDIR PLLAGAGTLP MLVQAPEPGL DLMEALGELK PLVAEHLYSA GGILFRGFEV
GGAEAFREFA AGFGDPLLNY EFGSTPRSNV TKGVYTSTEY PAHQSIPLHN EQAYTLDWPM
KIWFYSMIAA QTGGETPIAD SREIYRRIPA RIRDRFIEKK LMYVRNYGNG LDVEWSQVFN
TEDERVVEAY CQAHNIECEW KDDGELRTRQ ICQAVSRHPV TQDTVWFNQA HLFHISNLQP
EVRETLLDVV DEEDLPRNVY YGDGSPIEET LLDEIRGVLD DCTVSFPWLE NDVLMLDNML
TAHSRAPFTG KRKVVVAMAQ GHSDK
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