| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2104 |
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| Symbol | |
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| ID | 1183751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2278340 |
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| End bp | 2279638 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637393483 |
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| Product | major facilitator family transporter |
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| Protein accession | NP_791927 |
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| Protein GI | 28869308 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.386264 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCTCCA CAACAAGCAC AAGCAAGGGC AAAGCGATCT TTCGCGTTGT CAGCGGTAAC
TTCCTCGAGA TGTTCGACTT CATGGTCTAT GGCTTTTACG CCACGGCCAT TGCCAAGACC
TTCTTCCCGT CCGACAGCGC ATTCGCATCG TTGATGCTGT CGCTGGCGAC GTTCGGCGCA
GGCTTTTTGA TGCGTCCGCT GGGTGCGATA TTCTCGGGTG CCTACATCGA CCGTCACGGA
CGCCGCAAGG GGCTGATTAT CACCCTTGCC ATGATGGCAA TGGGCACTCT GTTGATCGCC
TGCGTGCCGG GTTACGCCAC GCTGGGCGTG ATTGCACCGC TGCTGGTGCT GCTCGGCCGA
CTGCTGCAAG GCTTTTCGGC GGGTGTGGAA CTGGGTGGTG TTTCGGTCTA TCTGGCCGAA
ATATCGACAC CGGGCCGTAA AGGCTTTTTT GTAAGCTGGC AGTCCGCCAG CCAGCAAGCC
GCCGTGGTAT TCGCCGGTTT GCTGGGCGTT GGCCTGAACC ACTGGCTGAG CCCCGAGCAG
ATGGGCGAAT GGGGCTGGCG CGTACCGTTT CTGATCGGCT GCCTGATCGT GCCGGCGATC
TTCATCATCC GCCGCTCGCT GGAGGAGTCC CCGGAGTTCG AAGCCCGCAC CCATCGCCCC
ACCTTGCGTG AAGTGGTGCG CTCCATCGGC CAGAACTTCG GCCTGGTGAT CGGCGGCATG
GCGCTGGTGG TCATGACCAC TGTGACGTTC TACCTGATTA CGGCGTACAC CCCGACCTTC
GGCAAGAACG AGCTGAACCT GACCGACCTT GAAAGCCTGC TGGTGACGGT CTGCGTCGGC
GTGTCCAACT TCATCTGGCT ACCGATCATG GGGTCGTTCT CGGACCGTAT CGGCCGCAAG
CCACTGCTGA TTGCAGCAAC CGTGCTGGCC ATCGCCACCG CCTACCCTGC CCTGTCGTGG
CTGGTAGCGC ACCCAAGCTT CGGCAACCTG CTGATGGTCG AGTTGTGGCT GTCGTTCCTG
TATGGCTCCT ACAACGGGGC GATGGTCGTG GCGCTGACCG AGATCATGCC GGTCGACGTT
CGCACCACCG GCTTCTCGCT GGCTTACAGC CTGGCAACGG CGACCTTCGG TGGCTTTACG
CCTGCGGCCT GCACCTACCT GATCCACGAA CTGGGCAACA AGGCAGCACC AGGCATCTGG
CTGACCGGCG CCGCCGTGCT GGGTCTGGTT GCGACGCTGG TGCTGTTCCG CAAGGGCGGG
CAAAAGCTTG AGGCCCCCGG AGCCGCTGCC AACGCTTGA
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| Protein sequence | MASTTSTSKG KAIFRVVSGN FLEMFDFMVY GFYATAIAKT FFPSDSAFAS LMLSLATFGA
GFLMRPLGAI FSGAYIDRHG RRKGLIITLA MMAMGTLLIA CVPGYATLGV IAPLLVLLGR
LLQGFSAGVE LGGVSVYLAE ISTPGRKGFF VSWQSASQQA AVVFAGLLGV GLNHWLSPEQ
MGEWGWRVPF LIGCLIVPAI FIIRRSLEES PEFEARTHRP TLREVVRSIG QNFGLVIGGM
ALVVMTTVTF YLITAYTPTF GKNELNLTDL ESLLVTVCVG VSNFIWLPIM GSFSDRIGRK
PLLIAATVLA IATAYPALSW LVAHPSFGNL LMVELWLSFL YGSYNGAMVV ALTEIMPVDV
RTTGFSLAYS LATATFGGFT PAACTYLIHE LGNKAAPGIW LTGAAVLGLV ATLVLFRKGG
QKLEAPGAAA NA
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