Gene PSPTO_2089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2089 
Symbol 
ID1183735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp2258114 
End bp2261395 
Gene Length3282 bp 
Protein Length1093 aa 
Translation table11 
GC content60% 
IMG OID637393467 
Producthost specificity protein J, internal deletion 
Protein accessionNP_791912 
Protein GI28869293 
COG category[S] Function unknown 
COG ID[COG4733] Phage-related protein, tail component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0154474 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCAGTG GCGTTAAAAA GATTGCCCAG GTAGCCGTCG GCGCTGTGAT CGGCTTCGTG 
CAAGGTGGCC CGGTCGGCGC TGCAATCGGC GCTGGCCTGG CCTTCTATGC AGCATCACAG
CAGGAGAAGC TCAACACCAA ATCACCGTTG CGCGATAACG AGCCGTCCGC TCAAACGGTG
AGGTCGTCCA AAGCACCGAT CCGATTCATC CTTGGCCGCG TATCCACCGG CGGCGTGCTG
GTCTGGGCGC AGGAGCAGTC CGGCACCCTC ACAGAAGGCG AGCAAATTCA CCTCGTATAC
GTGCTGTGTG AAGGCGCGAT CGATGGCCTG GAGAACATCT ACCTAGGTGA GGAAGAGATC
GGCTCGTTCG GTGAGTTCGC GAGCTATGAG CTGATCGTCA ACCCGACAGA GGTGAACGCA
TTCCTCAAGG CCAACTGCCA GGACTGGAAA GACAGCCAGA TCGGGCGCGG CCTGTCGTTC
GTGCGCATCA CCCTGAAGTA CAGCGCCGAG AAGTTCCCGT CTGGCATCCC TGACACCCGC
TTTGTGGTCC GTGGCCGTAA TGACATCTAC GACCCGCGCA CCGGCAACAA CATCTACACC
GCCAACACCG CGCTGCACAT CCTCTGGTAT CTACGCACCC GCTGCAACGT TCCGGATGAC
GAGATCATTT TCGAGACATT TGCCAGTGCG GCAAACGTCT GCGATGAAGC GCTGACCAAT
GCCGATGGCT CCGTCAGCCA GCGCTATCGC ACTTCTTGCG TGATTGGTGC TGATGAGCAA
CGTCCGGGCG TACTGCAGAA GCTGGAAGCG TCATGCGCCG GCAAGTTGAT CCGCGTCGGC
GGCCGCTGGA TGCTCCAGGC AGGGGCCTAT TACGGCCCGT ATGACTTCGA GATCACCGAA
GACATGATCA TCGGCACGGT CTCTGGAAGT ACCGAGTCGA CGAACGATTC CGCCATCAAC
ACGGTGCGCG GCACGTTCAT TGATCCTGAA CAGTCCTGGA CCGAGACGGA TTACCCAGAG
GTCAGCGTTT CCGAATGGAT TCTTGAGGAC GGCGGCGAAG CTGCTGAGAC GATGACGTTC
TCGTATGTGA CCGACGCCTA TCAGCCTCAG CGCCTGGCGA ACATCGCCAT GCGCCAAAGG
CGTGCTGGCG GCGCAATCAG CCTGCCGATG AACTTCTCAG GCTACAACTG CCGGCCTGGC
CGAGTAGTGC GTGTGAACCT GCCGTCACTG AACATCCTTG GCGAGTTCAT CGTCTCCGAC
TGGTCTATGG GTGACAGCGA AGGATGCACG GTTCAGGTCA AGCAGTACGA GGCGGCAATC
TTCGATGATG CCGTGGGCCA GCCTTACAAC CCGCTGGGGT TCATCAACCT GCCAAGCGGC
GGGCTTGGCT CGCCCACCGG GCTTGCATGG TCTCCTGGCG ATGCTGCTGA GGTGGTGCAG
GGCGTACTGT CGTGGGTTCC ACCGCTGGGC ATCGTCACCT CCTATGTGGT CACGGTCCGC
CAGGGCGGTG GTGTCGCTCA GTCACGCTCG GTGCCCGCGA CGGCCAACAC GCTTGCCATC
AACGGATTGG CGTCAGGCAT ATACACAATG AGTGTGGCCG CCCTGGGCCC AATGGCCCGA
TCTGGCGAAG CGAGTATATC GGTGAGCATT CAGGGGCCTC CTATCCCTGA GTCGTGCGTG
GTGCAATCGT CGATCGACAG TATCGTGCTG ATCCCGCAGA ACCCGAACCA CGGCTTGAAC
GGCGGCACCT ACGAGTACTT TTTCAGCACC AACCCCAATG CGACATCGGG CACGGCGCAG
TACCTGGGCC AGGGCCAGTC GTTCACCCAC AACGATCTGG CGTTCTACAC CAACTATTAC
TACTTCATCC GCTCGACCAA CGCATACGGG AAGAGCGCCT TTCTTTATGT GCCTACGTCG
ACATCAAACG ATGTGTCGGC CTATCTGTCT GCTCTGGCCG GCAAGATCAG CAAGACCGAG
CTTGCGCAGA ACCTGCTTTC AGAGATTGAG CTGATTAGTG GCGACGGTGA CGGATCGGTT
AATGAGCGCC TGGCTGAGCT CAAGGCCGAG ATCGGAGAAA TCACCGACGC GCTGGTCTAT
GTGCCGACTG ACGCCTATGT CCGCGACAAC ACCGTGCGCG TGGGTGACAA CCTCTGGACG
GCCATTGCAG CGGTGCCTGC GGCTGCCAAT GGATCGAACG GCCCGCCGAA CCCGGCTTAC
TGGGTGAACA CAGGCCAGTC CATTCGCGCC GCTAACGCCC AGGCTGATCA GGTTTCCAAA
AACACAGCCA ACATCGAGAC GGTGAACGGC AGGACCACGG CGACCGCAAG TCAGCTCCAG
GCAGTGCAGG CGCAGTACCG GGCCGACAGC GGGGAAGGCG ATCTGCTCGA TGCGCTCAGA
GGTTGGGACA GCACGGCCAG CGCGGCACAG GAAGTGAAGA TCAGGGCGGA AGAGGATTTC
GCCCAGGCTC AGCGCACCAC GACTCTGCAA GCGCGTGTCG GCACCAATGA GGCACGAATC
ACCACCGTCG AAACGACGAC TGCCACGGAC CGCGAGGCGA CTGCCCAGCG GATTACGGCA
ATCGATTCTC GCGTAGGTAC GAGCGAATCG AAGATCACGA CGATTGAGTC AACCGCAAAC
ACGGACCGGC AGGCCACCGC TCAACAGATA CAGACGCTGA CCTCGTCCGT CGGTAGCAAT
CAGGCCGCCA TCCAGTCTGA AGCAACCACC AGAGCCAACG CAGACGGCGC GCTGTCCACG
CGAGTGGATG GGGTTCAAAC AACTGCTAAT AACGCCAGTG CTGCGGTTCA GACCGTAAGC
ACAGCCCAGG CGAGCACTGA CGGCAAGCTG ACGGCGATGT ATACCGTCAA ATTGCAAGTC
AACTCCAACG GCCAGTACGT CATGGCCGGG ATAGGCGCAG GGATTGAGAA TGTTGGCGGT
GTGCTGCAAA GCCAGATCCT CATGTCGGCT GATCGGTTTG CGCTGGTGAA CACGTTAGCG
GGTGGTGCTA TTTCGACGCC TTTCGTTGCA CAGAACGGCC AGTTGTTCCT TGGTCCGACG
TTCATCCAAG ACGGCACGAT CACCAACGCC AAGATTGGGA GTTACATCAG TTCGACCAAT
TACCTGGCCG GGCAGAGCGG TTGGATTCTG AGCAAAGACG GTACGTTCGA AATCAACTCA
CCACTTGCCG GGGGAGGCAG GCAGGTCATT AACGGTCAAG GCGGCAAGGT TTATGACGAG
CGAGGCCAGT TGCGCTACCA GTGGGGGAAT TTAGCCGCAT GA
 
Protein sequence
MPSGVKKIAQ VAVGAVIGFV QGGPVGAAIG AGLAFYAASQ QEKLNTKSPL RDNEPSAQTV 
RSSKAPIRFI LGRVSTGGVL VWAQEQSGTL TEGEQIHLVY VLCEGAIDGL ENIYLGEEEI
GSFGEFASYE LIVNPTEVNA FLKANCQDWK DSQIGRGLSF VRITLKYSAE KFPSGIPDTR
FVVRGRNDIY DPRTGNNIYT ANTALHILWY LRTRCNVPDD EIIFETFASA ANVCDEALTN
ADGSVSQRYR TSCVIGADEQ RPGVLQKLEA SCAGKLIRVG GRWMLQAGAY YGPYDFEITE
DMIIGTVSGS TESTNDSAIN TVRGTFIDPE QSWTETDYPE VSVSEWILED GGEAAETMTF
SYVTDAYQPQ RLANIAMRQR RAGGAISLPM NFSGYNCRPG RVVRVNLPSL NILGEFIVSD
WSMGDSEGCT VQVKQYEAAI FDDAVGQPYN PLGFINLPSG GLGSPTGLAW SPGDAAEVVQ
GVLSWVPPLG IVTSYVVTVR QGGGVAQSRS VPATANTLAI NGLASGIYTM SVAALGPMAR
SGEASISVSI QGPPIPESCV VQSSIDSIVL IPQNPNHGLN GGTYEYFFST NPNATSGTAQ
YLGQGQSFTH NDLAFYTNYY YFIRSTNAYG KSAFLYVPTS TSNDVSAYLS ALAGKISKTE
LAQNLLSEIE LISGDGDGSV NERLAELKAE IGEITDALVY VPTDAYVRDN TVRVGDNLWT
AIAAVPAAAN GSNGPPNPAY WVNTGQSIRA ANAQADQVSK NTANIETVNG RTTATASQLQ
AVQAQYRADS GEGDLLDALR GWDSTASAAQ EVKIRAEEDF AQAQRTTTLQ ARVGTNEARI
TTVETTTATD REATAQRITA IDSRVGTSES KITTIESTAN TDRQATAQQI QTLTSSVGSN
QAAIQSEATT RANADGALST RVDGVQTTAN NASAAVQTVS TAQASTDGKL TAMYTVKLQV
NSNGQYVMAG IGAGIENVGG VLQSQILMSA DRFALVNTLA GGAISTPFVA QNGQLFLGPT
FIQDGTITNA KIGSYISSTN YLAGQSGWIL SKDGTFEINS PLAGGGRQVI NGQGGKVYDE
RGQLRYQWGN LAA