Gene PSPTO_2083 details

Gene Information

• Locus tag: PSPTO_2083
• ID: 1183729
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: -
• Start bp: 2255556
• End bp: 2256083
• Gene Length: 528 bp
• Protein Length: 175 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637393461
• Product: hypothetical protein
• Protein accession: NP_791906
• Protein GI: 28869287

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.000190208
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACGAAA AAGACGCCGT TTTATTTCAG CAACTCCACA CCGAGGAGCT TGAGAGAAGG 
ATTAAATTTT TAGAGGAAAG CAACGACGAA TCAACACGTT ACCTCGACGA GCTTTGCTTA 
AAGCGAAATG CTGCGCTCGA AAGATGGATG CCTAGCGGGA AAGTCTGCCG GGAGACGGTT 
CGGGCGTATG TAAAGAGCGA GCTTGAGGCC CTTGAAGCGG TTCATAAAAA TGGCGGAAAC 
AGGCACCAGA AGGCTCTTGA CCAGCAAGAC GATTTGGAAG CTCTGCTGGA GGGGCTTAAT 
GACGACGAAA AGCTGAAGAT TATCAACATG CAGACTGCGG AGATATTAGC CGCTGATGCA 
AAAATGAAAG ATGATCTTCA TGAGATTCTC AATCCCCCGC TTGAAACTAT AGATCGTGAC 
CCTCAGCCTT CTTCAATTGA AATAGAGCCG AGCTCGGGCA AGGGAATCAT GGTAGTGCTG 
TTGTTTGTGG CGGTTGTAAT GCTGGTTCTT TTCAAAATTG CGTCATAG 

 

Protein sequence

MDEKDAVLFQ QLHTEELERR IKFLEESNDE STRYLDELCL KRNAALERWM PSGKVCRETV 
RAYVKSELEA LEAVHKNGGN RHQKALDQQD DLEALLEGLN DDEKLKIINM QTAEILAADA 
KMKDDLHEIL NPPLETIDRD PQPSSIEIEP SSGKGIMVVL LFVAVVMLVL FKIAS