Gene PSPTO_2081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2081 
Symbol 
ID1183727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp2254123 
End bp2254575 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content61% 
IMG OID637393459 
Producthypothetical protein 
Protein accessionNP_791904 
Protein GI28869285 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000634214 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTATG AGCAGATCCG CAGAGCTATC ACGGCGCGCA TGGTGGCCTT CACCGGGATT 
GAGCAGGAAC GCATTTTCTA TCCCAACGCT CAGTACCCGG CTCAGAACCA AGACGGCTCA
GGCGTGTTCA AGCCGCCTGC CGACGGCCTA TGGTGCCGCC TACACATCCA GCACGCCACC
GCCTTCATGG CCGGCATGGC CGACCAGCCC TACACCCGAA AGCCCGGCAT TATCGTCGTG
CAGTGCTTTG CCCGGCTTCG CACCGGCATG CGCGGCCTGA ATGAACTGGC CGACGCACTG
GAAGCGCACT TTGCCTACTG GACTGAAGGC GACCTTGAGT GCATCGAGGC CAGCCAGGTC
GACGCAGGCG AGTACGAAGG CTTCTATCAG ATCAACGTGA ATATCCGGTT TCCGCGCCGG
TTGAACCTGA AGCACCCATC CGGCCCGCCT TGA
 
Protein sequence
MTYEQIRRAI TARMVAFTGI EQERIFYPNA QYPAQNQDGS GVFKPPADGL WCRLHIQHAT 
AFMAGMADQP YTRKPGIIVV QCFARLRTGM RGLNELADAL EAHFAYWTEG DLECIEASQV
DAGEYEGFYQ INVNIRFPRR LNLKHPSGPP