Gene PSPTO_2064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2064 
Symbol 
ID1183709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp2244569 
End bp2245540 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content57% 
IMG OID637393442 
Productmagnesium and cobalt transport protein, putative 
Protein accessionNP_791887 
Protein GI28869268 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0598] Mg2+ and Co2+ transporters 
TIGRFAM ID[TIGR00383] magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.00816438 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTCGAG TTGTTGCAGC AGCGGTTTAC ACCAAAGGCA AAAAAGTCCG CGACATTACC 
CTTGATGAAG GCGCTGCCTG GGCTGCAAAG CCCGAGCACT TTGTCTGGAT CGGGCTGGAG 
CAACCCAGCG CCGATGAGCT GACCAGTCTC AAAGAGCAGT TCAACCTGCA TGAACTGGCC 
CTTGAAGACG CGATGGAAGT TCACAGTCGC CCCAAGCTTG AAACCTTTGG CGATGCGCTG 
TTTATCGTGA CCTACGCGCC GGTGCGCGAT AACGGCAAAC TGGTGTTCAT CGAAACCCAT 
ATCTTCGCGG GCAAGGGTTA CGTCATCACC TCGCGCAATG GCCATTCAAA GTCTTACGGG 
CTGGTTCGTC AGCGCTGCGA AGCGCGGCCT TTGCTGCTGG AACACGGCGA AGACTTCGTG 
CTTTACGCCC TTCTGGATTT CGTCACCGAG AACTATCAGC CGGTGACCGA AGCCATTCAC 
ACCGAGCTTG AGCTGCTGGA GCAGAGCGTC ATCGGCGGTT CACTGCGCGA GTCTGATATC 
CAGCATATTC ATGCACTGCG TCGCGACCTG TTGCGAATGC GCCGTTACGT GGCACCGATG 
GTGGAAGTGG GCGAAGAACT GCAGCGACTC AGTTTTCCGT TTATCGACAA GAACATGCGC 
CCCTACTTCC GTGACGTGGA AATTCACGTG AAGCGCCAGA TGGAGGACCT GGGCAACCTG 
TGTGACATCG CCAGCCAGAC CATCGAAATA GGCCTGCTGC TGGAGTCCTC GCGACAAAGC 
ATCGTGCAGC GCAAGTTTGC CGGGTGGGCA GCCATTCTGG CGTTCCCGAC GGCGATTGCC 
GGCATCTACG GCATGAACTT CGAGAACATG CCCGAGCTCA AGTGGCACTA CGGCTACTTC 
ATCGTGCTGG GCGTGATCGT TGGCGGCTGT ACGGCACTGT TTGCCAGCTT CAAGCGCTCC 
GGCTGGCTAT AG
 
Protein sequence
MGRVVAAAVY TKGKKVRDIT LDEGAAWAAK PEHFVWIGLE QPSADELTSL KEQFNLHELA 
LEDAMEVHSR PKLETFGDAL FIVTYAPVRD NGKLVFIETH IFAGKGYVIT SRNGHSKSYG 
LVRQRCEARP LLLEHGEDFV LYALLDFVTE NYQPVTEAIH TELELLEQSV IGGSLRESDI 
QHIHALRRDL LRMRRYVAPM VEVGEELQRL SFPFIDKNMR PYFRDVEIHV KRQMEDLGNL 
CDIASQTIEI GLLLESSRQS IVQRKFAGWA AILAFPTAIA GIYGMNFENM PELKWHYGYF 
IVLGVIVGGC TALFASFKRS GWL