| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2053 |
|---|
| Symbol | |
|---|
| ID | 1183698 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 2233344 |
|---|
| End bp | 2234261 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637393431 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_791876 |
|---|
| Protein GI | 28869257 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0428] Predicted divalent heavy-metal cations transporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0183571 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGCAC CCGCACACCC CCGAATGACC TGGTCCAGCC ATTTTCAGGC CAGCCCACTG
GTGAGTCTGG GCTTCGCGCT AGCCTTGCTG ATCGTCGTCG GCCTTGGCGG CGTCAGCCTT
TACAACGCGT TTTATGGCGC CAGCCAGGTC AATTTCAATC ACGCATTGCT GGGCGGCACC
GCGGGCTTTC TGGCCACGGC GCTGGGTGCG GTGCTGGCGG TTGCACTGCG CGAGGTGTCA
CAACGCGCAC AGGACATCAT GCTCGGCTTT GCGGCAGGCA TGATGCTGGC TGCCAGCTCG
TTCTCGCTGA TTTTGCCTGG CCTTGCGGCC GCCCGTGACA TTACCGACAG CGGCCCCTGG
GCGGCTGCCA CAGTGGTGGC CGGGCTTGGG CTGGGCGTAT TGTTGATGCT GGGCCTGGAC
AAATTCACCC CGCATGAGCA CGAAAGCGTC GGCCGTCAGG GACCGCACTC GGAGCGCATC
AATCGGGTCT GGTTATTTGT ACTGGCGATC ACCCTGCACA ACCTGCCGGA AGGCATGGCG
ATTGGCGTAA GCTTTGCCAG CGGTGACATG AATGTCGGCT TGCCGCTGAC CACCGCTATC
GCCATTCAGG ACATCCCCGA AGGCCTGGCC ATTGCGCTGG CGCTGCGCTC CACAGGCCTG
TCGGCGTTCA AAGCCATGCT GGTGGCAATC GGTTCAGGCC TGATGGAGCC ACTGGGCGCG
CTGGTAGGGC TGGGCATTTC CAGCGGGTTT GCCATCGCCT ACCCGTTGAG CATGGGGCTG
GCTGCTGGCG CGATGATCTT CGTGGTGTCC CATGAAGTCA TCCCGGAGAC CCATCGCAAC
GGCCATCAGA CCTCGGCAAC GCTGGGCCTG ATGGGCGGTT TCGCCGTCAT GATGTTTCTC
GACACCGCAC TGGGTTAA
|
|---|
| Protein sequence | MPAPAHPRMT WSSHFQASPL VSLGFALALL IVVGLGGVSL YNAFYGASQV NFNHALLGGT
AGFLATALGA VLAVALREVS QRAQDIMLGF AAGMMLAASS FSLILPGLAA ARDITDSGPW
AAATVVAGLG LGVLLMLGLD KFTPHEHESV GRQGPHSERI NRVWLFVLAI TLHNLPEGMA
IGVSFASGDM NVGLPLTTAI AIQDIPEGLA IALALRSTGL SAFKAMLVAI GSGLMEPLGA
LVGLGISSGF AIAYPLSMGL AAGAMIFVVS HEVIPETHRN GHQTSATLGL MGGFAVMMFL
DTALG
|
|---|
| |