| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2047 |
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| Symbol | |
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| ID | 1183692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2229723 |
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| End bp | 2230406 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637393425 |
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| Product | HAD-superfamily hydrolase |
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| Protein accession | NP_791870 |
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| Protein GI | 28869251 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4229] Predicted enolase-phosphatase |
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| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
[TIGR01691] 2,3-diketo-5-methylthio-1-phosphopentane phosphatase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0777387 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCATCA AAGCCATTCT CACGGACATC GAAGGCACTA CCAGTGCCGT AAGCTTCGTG
TTCGACGTAT TGTTTCCGTT CGCCAGAGCG CACCTGCCCG ATTTTGTTCG TCAACATGCC
GAGCAGCCTC AGGTGGCGGC GCAGTTGCAG GCGGTGCGCA CGCAGAGCGC CGAGCCGGAT
GCCGATGTCG AGCGGGTGAT CGCGATTCTG CTTGAGTGGA TTGCCGAAGA CCGCAAGGCC
ACGCCGCTCA AGGCATTGCA GGGCATGGTC TGGGAGCAGG GTTATAACGC CGGGCAGCTC
AAGGGGCATG TCTATCCCGA CGCCGTTGAC GCACTGCAAC ACTGGCACCA GCAGGGCTAC
AGACTTTTCG TGTATTCGTC GGGTTCGATT CAGGCCCAGC AACTGATTTT CGGCTGCTCG
GAAGCGGGCG ATCTTTCCGG TCTGTTCAGC GGCTACTTCG ACACCACGTC GGGGCCCAAG
CGCGAGGCGC AGTCTTACCA GACAATCGCC AACGCCACAG GCTTTGCCGC CGAAGAGATT
CTGTTTCTCT CGGATATTGT CGAAGAACTC GACGCCGCAA AAGCTGCCGG CATGCTCACG
TGCGGCCTGG CGCGTGATGG CGGAGTGCTC GCGGGACACC GGCATGTGAA CAGTTTTACG
CTCATCGATC CCGCTTCTTT CTAG
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| Protein sequence | MPIKAILTDI EGTTSAVSFV FDVLFPFARA HLPDFVRQHA EQPQVAAQLQ AVRTQSAEPD
ADVERVIAIL LEWIAEDRKA TPLKALQGMV WEQGYNAGQL KGHVYPDAVD ALQHWHQQGY
RLFVYSSGSI QAQQLIFGCS EAGDLSGLFS GYFDTTSGPK REAQSYQTIA NATGFAAEEI
LFLSDIVEEL DAAKAAGMLT CGLARDGGVL AGHRHVNSFT LIDPASF
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