Gene PSPTO_2023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2023 
Symbol 
ID1183668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp2211408 
End bp2211950 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content59% 
IMG OID637393401 
Productexonuclease, putative 
Protein accessionNP_791846 
Protein GI28869227 
COG category[R] General function prediction only 
COG ID[COG5018] Inhibitor of the KinA pathway to sporulation, predicted exonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0659436 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCATT GGCTGGTGAT TGATCTGGAG GCGACTACCG AAGAAGGTGG CTGGCCGGTC 
GCAGAAATGG AAGTCATCGA GATAGGTGCG ACGCTGGTCA ATCAGGATGG GCGCGAGCTG
GACCATTTCG AACGCTTCGT ACGCCCCGCA CGCAGGCCGC TGTTGACTCA TTTTTGCAAG
GAGCTGACCC ATATCAGCCA GAGCAACATC GACAGCGCTG CGCCGCTGAC CACCGTATGG
CCGCAGTTCG AGCGCTGGCT GAGCCATCAT CGCGCCCGAG TAGTGGGCTG GGCCAGTTGG
GGGGATTATG ATCGTCAGCA ACTGGAAGAA GAATGGCGCC GTCATCAACT TGGCAGTGCG
TTGTCCAGCA TGCCGCATGT CAATCTCAAA CAACGTTTCG CACAAGCCCG TCAGTTGCAA
AAACCGGTGG GGCTGAACAG TGCGTTGCAG CTGGCGGGTA TGCAGTTCAG CGGGCAACAG
CACAGGGCGC TGGTAGATGC GCGTAATACC GCCAGGCTTT TGCCGCTGAT TCTGCCCAAC
TGA
 
Protein sequence
MPHWLVIDLE ATTEEGGWPV AEMEVIEIGA TLVNQDGREL DHFERFVRPA RRPLLTHFCK 
ELTHISQSNI DSAAPLTTVW PQFERWLSHH RARVVGWASW GDYDRQQLEE EWRRHQLGSA
LSSMPHVNLK QRFAQARQLQ KPVGLNSALQ LAGMQFSGQQ HRALVDARNT ARLLPLILPN