Gene PSPTO_2014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2014 
Symbolaer-2 
ID1183659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp2200378 
End bp2201943 
Gene Length1566 bp 
Protein Length521 aa 
Translation table11 
GC content62% 
IMG OID637393392 
Productaerotaxis receptor 
Protein accessionNP_791837 
Protein GI28869218 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein
[COG2202] FOG: PAS/PAC domain 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAACA ACCAGCCCGT CACTCAACGC GAGCGGACAT TTCCTGCCGA ACAGCGACTG 
ATCTCCACCA CCGACACTCG CGGCACCATC ACGTACTGCA ACGATGCTTT CGTCGATATC
AGCGGTTACA GCGAGGCAGA ACTGCTCGGT GCCGCGCACA ACACAGTGCG CCACCCGGAC
GTGCCGCCAG CGGTGTTCGA GCATATGTGG ACCACGCTCA AGACCGGTCA GCCATGGATG
GGTATCGTCA AGAACCGTTG CAAGAATGGC GACCATTACT GGGTCAACGC CTATGTGACG
CCGGTGCTGG AAAACCGCCA GGTCGTGGGT TTCGAGTCGG TGCGCATCAA GCCGACCGCC
GAACAGATTC GTCGGGCCGA AACACTTTAC GCGCGCATCA ATAACGGCAA GAGCGCCGTA
CCGGGCCGTG ATAAATGGCT GCCGATACTT CAGGACTGGC TGCCGTTCAT TATGGTCAGC
CAGTTGAGCT TTCTGATCGG CGTGTGGCTC AATTCGCAGT GGGGCTTCGC ACTGGCTGCA
GCGTTGTCGG TGCCGCTGGG CTTGCTGGGG CTGTCCTGGC AGCAACGCGG CACCAAACGC
CTGTTGCGAC TGGCCGAACA GACCACCTCC GACCCGTTGA TCGCTCAGAT GTACACCGAC
AGCCGTGGCC CGCAAGCGCG TCTGGAGATG TCGATCCTCA GCCAGCAAGC GCGTCTGAAA
ACCTGCCTGA CCCGCTTGCA GGACACCGCC GAGCATTTGA ACAATCAGGC CCGCCAGGCC
AACTCGCTGG CCAACGCCAG CTCGACCGGG CTGGAGCGCC AGCGCGTGGA AACCGAGCAG
GTCGCCGCCG CGATCAATCA GATGGCCGCA ACCACCCAGG AAGTCGCCAG CCACGTCAAT
CGCGCCGCTG ACGCCACCCA ACAAGCCAAC GAACTGACCC GTCGCGGCCG CGACATTGCC
GGTGAAACCC GCGAAGCCAT TCAGCGCCTG TCCACTTCGG TGGGTGAAAC CGGCCTGACC
GTGACCAGGC TGGCCAAGGA CAGCGACGAA ATCGGCGGCG TGGTCGATGT GATCAAAGGC
ATCGCCGACC AGACCAACCT GCTGGCCCTC AACGCCGCCA TCGAAGCCGC ACGTGCTGGC
GAGATGGGTC GCGGGTTTGC CGTCGTGGCA GATGAAGTGC GCCAACTGGC GCAACGCACC
GCCGAGTCCA CCGGACAGAT TCACGGTTTG ATCGCCAAAC TGCAGCAGAC CGCCAACGAC
GCGGTGCAGA CCATGAACAC CGGTCGTCTT CAGGCTGAAG AAGGTGTCGC GCGGGTACTG
GAAGCCGATC AGGCGTTGGT GGGCATCAGC GAGGCCGTCG CCAACATCAC CGACATGACC
ACGCAGATCG CCACCGCCAC TGAAGAACAA AGCGCGGTGG CCGAAGAGAT CAACCGCAAC
ATCTCGACCA TCGCCAGCCT GGCCGACACG ACCTCAGACG AGGCCCGTCG CTCGGCAATA
CTGAGTGGCG AACTGACCGA TACGGCCAAC TCCCAGTATT CGCTTGTGGA ACGATTTAAT
CGCTGA
 
Protein sequence
MRNNQPVTQR ERTFPAEQRL ISTTDTRGTI TYCNDAFVDI SGYSEAELLG AAHNTVRHPD 
VPPAVFEHMW TTLKTGQPWM GIVKNRCKNG DHYWVNAYVT PVLENRQVVG FESVRIKPTA
EQIRRAETLY ARINNGKSAV PGRDKWLPIL QDWLPFIMVS QLSFLIGVWL NSQWGFALAA
ALSVPLGLLG LSWQQRGTKR LLRLAEQTTS DPLIAQMYTD SRGPQARLEM SILSQQARLK
TCLTRLQDTA EHLNNQARQA NSLANASSTG LERQRVETEQ VAAAINQMAA TTQEVASHVN
RAADATQQAN ELTRRGRDIA GETREAIQRL STSVGETGLT VTRLAKDSDE IGGVVDVIKG
IADQTNLLAL NAAIEAARAG EMGRGFAVVA DEVRQLAQRT AESTGQIHGL IAKLQQTAND
AVQTMNTGRL QAEEGVARVL EADQALVGIS EAVANITDMT TQIATATEEQ SAVAEEINRN
ISTIASLADT TSDEARRSAI LSGELTDTAN SQYSLVERFN R