Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2014 |
Symbol | aer-2 |
ID | 1183659 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 2200378 |
End bp | 2201943 |
Gene Length | 1566 bp |
Protein Length | 521 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637393392 |
Product | aerotaxis receptor |
Protein accession | NP_791837 |
Protein GI | 28869218 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein [COG2202] FOG: PAS/PAC domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCAACA ACCAGCCCGT CACTCAACGC GAGCGGACAT TTCCTGCCGA ACAGCGACTG ATCTCCACCA CCGACACTCG CGGCACCATC ACGTACTGCA ACGATGCTTT CGTCGATATC AGCGGTTACA GCGAGGCAGA ACTGCTCGGT GCCGCGCACA ACACAGTGCG CCACCCGGAC GTGCCGCCAG CGGTGTTCGA GCATATGTGG ACCACGCTCA AGACCGGTCA GCCATGGATG GGTATCGTCA AGAACCGTTG CAAGAATGGC GACCATTACT GGGTCAACGC CTATGTGACG CCGGTGCTGG AAAACCGCCA GGTCGTGGGT TTCGAGTCGG TGCGCATCAA GCCGACCGCC GAACAGATTC GTCGGGCCGA AACACTTTAC GCGCGCATCA ATAACGGCAA GAGCGCCGTA CCGGGCCGTG ATAAATGGCT GCCGATACTT CAGGACTGGC TGCCGTTCAT TATGGTCAGC CAGTTGAGCT TTCTGATCGG CGTGTGGCTC AATTCGCAGT GGGGCTTCGC ACTGGCTGCA GCGTTGTCGG TGCCGCTGGG CTTGCTGGGG CTGTCCTGGC AGCAACGCGG CACCAAACGC CTGTTGCGAC TGGCCGAACA GACCACCTCC GACCCGTTGA TCGCTCAGAT GTACACCGAC AGCCGTGGCC CGCAAGCGCG TCTGGAGATG TCGATCCTCA GCCAGCAAGC GCGTCTGAAA ACCTGCCTGA CCCGCTTGCA GGACACCGCC GAGCATTTGA ACAATCAGGC CCGCCAGGCC AACTCGCTGG CCAACGCCAG CTCGACCGGG CTGGAGCGCC AGCGCGTGGA AACCGAGCAG GTCGCCGCCG CGATCAATCA GATGGCCGCA ACCACCCAGG AAGTCGCCAG CCACGTCAAT CGCGCCGCTG ACGCCACCCA ACAAGCCAAC GAACTGACCC GTCGCGGCCG CGACATTGCC GGTGAAACCC GCGAAGCCAT TCAGCGCCTG TCCACTTCGG TGGGTGAAAC CGGCCTGACC GTGACCAGGC TGGCCAAGGA CAGCGACGAA ATCGGCGGCG TGGTCGATGT GATCAAAGGC ATCGCCGACC AGACCAACCT GCTGGCCCTC AACGCCGCCA TCGAAGCCGC ACGTGCTGGC GAGATGGGTC GCGGGTTTGC CGTCGTGGCA GATGAAGTGC GCCAACTGGC GCAACGCACC GCCGAGTCCA CCGGACAGAT TCACGGTTTG ATCGCCAAAC TGCAGCAGAC CGCCAACGAC GCGGTGCAGA CCATGAACAC CGGTCGTCTT CAGGCTGAAG AAGGTGTCGC GCGGGTACTG GAAGCCGATC AGGCGTTGGT GGGCATCAGC GAGGCCGTCG CCAACATCAC CGACATGACC ACGCAGATCG CCACCGCCAC TGAAGAACAA AGCGCGGTGG CCGAAGAGAT CAACCGCAAC ATCTCGACCA TCGCCAGCCT GGCCGACACG ACCTCAGACG AGGCCCGTCG CTCGGCAATA CTGAGTGGCG AACTGACCGA TACGGCCAAC TCCCAGTATT CGCTTGTGGA ACGATTTAAT CGCTGA
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Protein sequence | MRNNQPVTQR ERTFPAEQRL ISTTDTRGTI TYCNDAFVDI SGYSEAELLG AAHNTVRHPD VPPAVFEHMW TTLKTGQPWM GIVKNRCKNG DHYWVNAYVT PVLENRQVVG FESVRIKPTA EQIRRAETLY ARINNGKSAV PGRDKWLPIL QDWLPFIMVS QLSFLIGVWL NSQWGFALAA ALSVPLGLLG LSWQQRGTKR LLRLAEQTTS DPLIAQMYTD SRGPQARLEM SILSQQARLK TCLTRLQDTA EHLNNQARQA NSLANASSTG LERQRVETEQ VAAAINQMAA TTQEVASHVN RAADATQQAN ELTRRGRDIA GETREAIQRL STSVGETGLT VTRLAKDSDE IGGVVDVIKG IADQTNLLAL NAAIEAARAG EMGRGFAVVA DEVRQLAQRT AESTGQIHGL IAKLQQTAND AVQTMNTGRL QAEEGVARVL EADQALVGIS EAVANITDMT TQIATATEEQ SAVAEEINRN ISTIASLADT TSDEARRSAI LSGELTDTAN SQYSLVERFN R
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