Gene PSPTO_2001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2001 
SymbolccoP 
ID1183646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp2184736 
End bp2185713 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content63% 
IMG OID637393379 
Productcytochrome c oxidase, cbb3-type, subunit III 
Protein accessionNP_791824 
Protein GI28869205 
COG category[C] Energy production and conversion 
COG ID[COG2010] Cytochrome c, mono- and diheme variants 
TIGRFAM ID[TIGR00782] cytochrome c oxidase, cbb3-type, subunit III 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.659912 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACGT TCTGGAGCCT GTACGTCACC CTACTGACGC TGGGCACAAT CATCGCCATG 
CTCTGGCTGC TGCTGTCCAC CCGCAAGGGC CAGCGCGAGG AGCCGACCGA CGAAAAAGTC 
GGCCACTCGT TCGACGGCAT CGAGGAGTAC GACAATCCGC TGCCCAGGTG GTGGTTCCTG 
CTGTTCATCG CCACCCTTAT ATTCGCGCTG GCTTATCTGC TGCTGTATCC GGGCCTGGGC 
AATTGGCAGG GGCTATTGCC CGGTTACGAG TACAGGGACA AGGGCAGCAC CTCGCAGTTC 
TCGGATGGCC AGCAGGGCTG GAGCAGTGTT CACGAGTGGG AGCGCGAAGT CGCCAGTGCC 
GAGGCACGCT ACGGCCCGCT GTTCGCCCGG TATGCAGCGA TGCCCGTCGA GGAAGTGGCC 
AAAGACCCGC AGGCACTGAA AATCGGCGCG CGCCTGTTCG CGTCCAACTG CTCGGTCTGC 
CATGGCTCCG ACGCTAAAGG TGCCTACGGT TTTCCCAACC TCACCGACGC GGACTGGCGC 
TGGGGCGGCG ATGCTCAGGC AATCAAGACG TCGATCATGG CCGGGCGCAT GGGCGTGATG 
CCGGCCTTGG GCGAAGTGCT TGGCGAACAA GGCGTGCGCG ATGTATCGGC CTATGTGCTG 
ACCCGACTGG ACGCCCGGCA ACTGCCCGAA GACGCCAAGG CTGACCCAGT CGCGGGCCAG 
AAGACTTTCG CCACGCTCTG CGCTGCCTGC CATGGACCGG AAGGCAAAGG CATGCCGATC 
TTGGGCGCAC CGGACCTGAC GCACCCGAAT GCGTTTATTT ACGGTGCCAG TTTCGCCCAG 
CTTCAACAGA CCATCCGCGA CGGTCGCCAG GGCCAGATGC CCGCTCAGCA AGCGTTGCAG 
GGTAATGACC GGGTTCACAT CCTCGCCGCC TACGTTTACA GCCTGTCTCG TCAGGAGAAA 
CCGGCAGAGC CCAAGTGA
 
Protein sequence
MSTFWSLYVT LLTLGTIIAM LWLLLSTRKG QREEPTDEKV GHSFDGIEEY DNPLPRWWFL 
LFIATLIFAL AYLLLYPGLG NWQGLLPGYE YRDKGSTSQF SDGQQGWSSV HEWEREVASA 
EARYGPLFAR YAAMPVEEVA KDPQALKIGA RLFASNCSVC HGSDAKGAYG FPNLTDADWR 
WGGDAQAIKT SIMAGRMGVM PALGEVLGEQ GVRDVSAYVL TRLDARQLPE DAKADPVAGQ 
KTFATLCAAC HGPEGKGMPI LGAPDLTHPN AFIYGASFAQ LQQTIRDGRQ GQMPAQQALQ 
GNDRVHILAA YVYSLSRQEK PAEPK