Gene PSPTO_1994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1994 
Symbol 
ID1183639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp2178539 
End bp2179222 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content67% 
IMG OID637393372 
Producthypothetical protein 
Protein accessionNP_791817 
Protein GI28869198 
COG category[S] Function unknown 
COG ID[COG2836] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.31903 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGAGC TGGCGCCGGT GTTGCTGTCC GCGCTTGTTC TCGGCCTGCT GGGCGGCGGT 
CATTGCCTGG GAATGTGTGG CGGCCTGATG GGTGCACTGA CGCTGGCTAT CCCCAAAGAG 
CAGCGCAACC GTCGCTTTCG CCTGCTGCTG GCCTATAACC TTGGGCGCAT TCTCAGCTAC 
GCCGTGGCAG GCTTTTGTTC CGGGCTGGTT GGCTGGGCGG TCGCGCAAAG CCCGCTGGCA 
ACGGGTTTGC GGGTCATGGC GGCGGTATTG CTGATTGTCA TGGGCCTGTA TCTGGCCGGT 
TGGTGGAGCG GGCTCACACA CATCGAGCGC CTGGGCCGAG GGCTGTGGCG CTACGTGCAG 
CCGCTGGCCA GTCGCTTGCT GCCAGTGTCC AGCCTGCCGC GCGCCTTGTT GCTCGGCGCC 
CTGTGGGGCT GGCTGCCCTG CGGGCTGGTC TACAGCGCCC TGCTCTGGGC CGCAAGCCAG 
GGCAACCCGG TCGACAGCGC ACTGCTGATG CTGGCCTTCG GGCTGGGTAC CTGGCCGGTT 
CTGCTGGCCA CCGGGCTTGC CGCTGAACGC ACCACTGCGC TGCTGCGCAA GCGTGGCGTT 
CGTGTGGCGG GCGGGCTGCT GGTGATCGTG TTTGGTGTGT GGACCCTACC GGGGCCTCAT 
CAGCACTGGC TGATGGGGCA TTGA
 
Protein sequence
MFELAPVLLS ALVLGLLGGG HCLGMCGGLM GALTLAIPKE QRNRRFRLLL AYNLGRILSY 
AVAGFCSGLV GWAVAQSPLA TGLRVMAAVL LIVMGLYLAG WWSGLTHIER LGRGLWRYVQ 
PLASRLLPVS SLPRALLLGA LWGWLPCGLV YSALLWAASQ GNPVDSALLM LAFGLGTWPV 
LLATGLAAER TTALLRKRGV RVAGGLLVIV FGVWTLPGPH QHWLMGH