Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1988 |
Symbol | cheW-2 |
ID | 1183633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2174064 |
End bp | 2174543 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637393366 |
Product | chemotaxis protein CheW |
Protein accession | NP_791811 |
Protein GI | 28869192 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0835] Chemotaxis signal transduction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.381098 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAGT CGTCTGCACA AGGTTCCGAA GATCCTATCC TGCAATGGGT TACGTTCCGC CTGGACAATG AGTCCTATGG CATCAACGTG ATGCAGGTGC AGGAAGTGCT GCGCTACACC GAGATCGCTC CGGTGCCGGG TGCGCCAAGC TACGTGCTGG GCATCATCAA CCTGCGCGGT AACGTTGTGA CCGTGATCGA CACCCGTCAG CGTTTTGGCC TGGCACCTGT TGAAGTCAGC GACAACACGC GTATTGTGAT CATCGAAGCC GACAAGCAAG TAGTCGGTAT TCTGGTCGAC AGCGTGGCGG AAGTGGTTTA CTTGCGTCAG TCCGAAGTCG AAACTGCGCC AAACGTGGGT AACGACGAAT CGGCCAAGTT CATTCAGGGC GTTTGCAACA AGAACGGCGA ACTGTTGATT CTGGTCGAAC TGGACAAAAT GATGTCCGAA GAAGAGTGGT CCGAACTGGA GAGCATCTGA
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Protein sequence | MNKSSAQGSE DPILQWVTFR LDNESYGINV MQVQEVLRYT EIAPVPGAPS YVLGIINLRG NVVTVIDTRQ RFGLAPVEVS DNTRIVIIEA DKQVVGILVD SVAEVVYLRQ SEVETAPNVG NDESAKFIQG VCNKNGELLI LVELDKMMSE EEWSELESI
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