Gene PSPTO_1988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1988 
SymbolcheW-2 
ID1183633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp2174064 
End bp2174543 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content54% 
IMG OID637393366 
Productchemotaxis protein CheW 
Protein accessionNP_791811 
Protein GI28869192 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.381098 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAGT CGTCTGCACA AGGTTCCGAA GATCCTATCC TGCAATGGGT TACGTTCCGC 
CTGGACAATG AGTCCTATGG CATCAACGTG ATGCAGGTGC AGGAAGTGCT GCGCTACACC
GAGATCGCTC CGGTGCCGGG TGCGCCAAGC TACGTGCTGG GCATCATCAA CCTGCGCGGT
AACGTTGTGA CCGTGATCGA CACCCGTCAG CGTTTTGGCC TGGCACCTGT TGAAGTCAGC
GACAACACGC GTATTGTGAT CATCGAAGCC GACAAGCAAG TAGTCGGTAT TCTGGTCGAC
AGCGTGGCGG AAGTGGTTTA CTTGCGTCAG TCCGAAGTCG AAACTGCGCC AAACGTGGGT
AACGACGAAT CGGCCAAGTT CATTCAGGGC GTTTGCAACA AGAACGGCGA ACTGTTGATT
CTGGTCGAAC TGGACAAAAT GATGTCCGAA GAAGAGTGGT CCGAACTGGA GAGCATCTGA
 
Protein sequence
MNKSSAQGSE DPILQWVTFR LDNESYGINV MQVQEVLRYT EIAPVPGAPS YVLGIINLRG 
NVVTVIDTRQ RFGLAPVEVS DNTRIVIIEA DKQVVGILVD SVAEVVYLRQ SEVETAPNVG
NDESAKFIQG VCNKNGELLI LVELDKMMSE EEWSELESI