| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1974 |
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| Symbol | fliR |
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| ID | 1183619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2158184 |
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| End bp | 2158960 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637393352 |
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| Product | flagellar biosynthetic protein FliR |
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| Protein accession | NP_791797 |
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| Protein GI | 28869178 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0533447 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTTGCGC TGACCGATAT CCAGATCAGT ACCTGGGTAG CCAGCTTCAT GTTGCCGATG
TTTCGTATCG TCGCGCTGTT GATGACCATG CCGGTGATCG GCACCACGCT GGTTCCCCGG
CGTGTCCGTC TTTACCTCGC CTTTGCCATC ACGGTAGTGG TCGCGCCAGC GCTGCCGGCC
ATGCCGCCGG TTCAGGCGCT TGACCTCAGT GGGCTGTTGC TGATCGGCGA GCAGATCATC
ATCGGTGCCG GCATGGGGCT GTCCCTGCAG ATGTTCTTCC ATATCTTTGT GATTGCCGGG
CAGATCATCT CGACGCAGAT GGGGATGGGC TTCGCTTCGA TGGTCGACCC CACCAACGGG
GTGTCTTCGG CAGTGATCGG GCAGTTCTTC ACCATGCTGG TGACCCTGTT GTTTCTGTCC
ATGAACGGTC ATCTGGTGGC GCTGGAAATC CTTGTCGAAA GCTTCACCAC GATGCCGGTG
GGGGGTGGTC TGCTGGTCAA CAACTTCTGG GAGCTGGCGA ACGGGCTGGG CTGGGCGCTG
AGCGCCGGGC TCAGGCTGGT TTTGCCCGCT GTCACGGCGC TGCTGATCAT CAACATCGCC
TTTGGCGTCA TGACTCGCGC TGCGCCACAG CTCAATATCT TTTCGATCGG CTTCCCGCTG
ACTCTGGTGC TGGGCATGGT CATCCTGTGG ATGACGATGG GTGACATTCT CAATCAGTAT
CAGCCCATTG CCACTCAGGC ACTGCAGATG CTGCGCGACA TGGTGAGGGC TCGTTGA
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| Protein sequence | MLALTDIQIS TWVASFMLPM FRIVALLMTM PVIGTTLVPR RVRLYLAFAI TVVVAPALPA
MPPVQALDLS GLLLIGEQII IGAGMGLSLQ MFFHIFVIAG QIISTQMGMG FASMVDPTNG
VSSAVIGQFF TMLVTLLFLS MNGHLVALEI LVESFTTMPV GGGLLVNNFW ELANGLGWAL
SAGLRLVLPA VTALLIINIA FGVMTRAAPQ LNIFSIGFPL TLVLGMVILW MTMGDILNQY
QPIATQALQM LRDMVRAR
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