| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1972 |
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| Symbol | fliP |
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| ID | 1183617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2157121 |
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| End bp | 2157873 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637393350 |
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| Product | flagellar biosynthetic protein FliP |
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| Protein accession | NP_791795 |
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| Protein GI | 28869176 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1338] Flagellar biosynthesis pathway, component FliP |
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| TIGRFAM ID | [TIGR01103] flagellar biosynthetic protein FliP |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000346072 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGCCT TGCGTTTCCT GATACTGCTG ATGCTGGCCG TGGTGGCACC TGCTGCGCTG
GCGGCCGATC CGCTGTCGAT ACCGGCGATC ACGCTGTCCA ACGGTGCCGA CGGGCAGCAG
GAATATTCGG TCAGTCTGCA GATTCTGCTG ATCATGACTG CGCTGAGCTT TATTCCGGCG
TTTGTCATGC TGATGACCAG TTTCACCCGG ATCATCATCG TCTTTTCTAT TCTGCGTCAG
GCCCTTGGCT TGCAGCAGAC ACCGTCGAAC CAGATCCTGA CCGGCATGGC GCTGTTTTTG
ACCATGTTCA TCATGGCGCC GGTTTTTGAC CGGGTGAATC AGGACGCATT ACAGCCCTAC
CTGGCTGAAA AGCTCACGGC GCAAGACGCC GTTGCCAAGG CGCAGGTGCC GATCAAGGAT
TTCATGCTGG CGCAGACCCG TACCAGCGAC CTTGAGCTGT TCATGCGTTT GTCCAAACGT
ACCGATATTC CGACACCGGA CGCTGCGCCG CTGACCATTC TGGTCCCGGC GTTCGTGATT
TCGGAGCTCA AGACGGCGTT TCAGATCGGC TTCATGATCT TTATTCCGTT TCTGATCATC
GACCTGGTGG TAGCCAGTGT GCTGATGGCG ATGGGCATGA TGATGCTCTC GCCGCTGATC
ATTTCCCTGC CGTTCAAGAT CATGCTGTTC GTGCTGGTGG ATGGCTGGGC GCTGATTGTC
GGCACCCTGG CTGGCAGTTT TGGTGGCGTA TGA
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| Protein sequence | MGALRFLILL MLAVVAPAAL AADPLSIPAI TLSNGADGQQ EYSVSLQILL IMTALSFIPA
FVMLMTSFTR IIIVFSILRQ ALGLQQTPSN QILTGMALFL TMFIMAPVFD RVNQDALQPY
LAEKLTAQDA VAKAQVPIKD FMLAQTRTSD LELFMRLSKR TDIPTPDAAP LTILVPAFVI
SELKTAFQIG FMIFIPFLII DLVVASVLMA MGMMMLSPLI ISLPFKIMLF VLVDGWALIV
GTLAGSFGGV
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