| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1971 |
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| Symbol | fliO |
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| ID | 1183616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2156681 |
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| End bp | 2157121 |
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| Gene Length | 441 bp |
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| Protein Length | 146 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637393349 |
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| Product | flagellar protein FliO |
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| Protein accession | NP_791794 |
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| Protein GI | 28869175 |
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| COG category | [N] Cell motility |
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| COG ID | [COG3190] Flagellar biogenesis protein |
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| TIGRFAM ID | [TIGR03500] flagellar biosynthetic protein FliO |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0391464 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGGCGGT GGCTGAGTGT TCTGCTGACC GTGCCGTCGC TGGCCTGGGC TGTCGAGCCT
GTTGCGCAGG CAGCACCGGC GCAGGTGGCC AACACGGTTT CCGGTGGCAT GGGCGGGCAG
GTGATGCAAC TGCTGTTTGG CCTGATCGTG GTGGTAGGGC TGATTTTCGT GCTGGCGTGG
GTCATGCGCC GGGTACAGCG CGTGGGGCCG AACAACGGGC AGGTCATCGA GCTGGTGAGC
ACGCGAGCGT TAGGCCCGCG TGATCGTCTG GTGCTGGTGC AGATTGGCAA CGAGCAGGTG
CTGCTGGGTA TCACGCCGGG ACGTATCACG CCCCTGCACG TACTCAAGGA ACCTGTGCAC
GTGCCGGTTC GTGAGCAGAC GACACCTGAA TTCGCTCAGC GCCTGATGGA GCTGATGGGC
AAGGATAAGG ACAAGAAGTA A
|
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| Protein sequence | MRRWLSVLLT VPSLAWAVEP VAQAAPAQVA NTVSGGMGGQ VMQLLFGLIV VVGLIFVLAW
VMRRVQRVGP NNGQVIELVS TRALGPRDRL VLVQIGNEQV LLGITPGRIT PLHVLKEPVH
VPVREQTTPE FAQRLMELMG KDKDKK
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