| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1946 |
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| Symbol | |
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| ID | 1183591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2127827 |
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| End bp | 2131402 |
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| Gene Length | 3576 bp |
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| Protein Length | 1191 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637393324 |
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| Product | glycosyl transferase, group 2 family protein |
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| Protein accession | NP_791769 |
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| Protein GI | 28869150 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1216] Predicted glycosyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.678208 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATTCAG CCCCCCTCGT CAGTATCGTC ATCCCCGCCT TCAATCCCCG GTTTTTCCGC
GCCGCGCTGC AAAGTGCCTT GAATCAGGTT TACGACAATC TGGAGATCAT CGTCTGCGAC
GATTGCCGCA GTGATGAAAT CAAAGCCATT TTCGACGAGT TGGCGCCTGC GTCCAGCGAC
CGTGCGCGAT ATGTGCGCAA CCCGCAGCGG CTGGGGTTTC AAGGCAACCT GCTGAAGTGC
CTGGACGAAT CACGCGGCCA CTACATCAAG TTTCTGTGTG ACGACGACCG CCTCTTTCCG
TACTTCATTG CCAATCAGGC AAGCGTTTTG GATGCCTATG AAGACGTGAG TCTGGTGGTT
GGCCGACGGC AGTTGGTCGA TATCGATGAT TACGTATTGC CGGCTCGTCT GGAAAACGTC
GGGCTGGTGC CTTATGACGC CGTGTTCAAA GGCGAGGACA TGCTGGCGAT TTTCGAGCGC
ACGCCACGCA ATTATCTGGG TGGCTTCAGT GCTGCACTGA TGCGCCGGGC CGATGTTCTG
GAGTACCTGC CTTCTATCGC CCAGTCGGGA CAGGGTTTTG TTGCACTGCT GGACTTCGCA
CTGCTCATTT GCTTGCTGCG CCGGGGCAAT CTGGTGGTGC TGCATACTAT TCAAAACGTC
GAGCGCCTGC ATCCAGGTCG TTTCAGCGGC CAGCCAGACA TGATCCAGAA AGCGACTACC
GAATGGGCCT GGTTGAACGA AATGCTCAAG GCGCGCAGCG GCGAGCAAGC CCCGGCCGAG
GGCTGGGTGC GTTTTCTGCC TCTGCGCAAG GCGCTGGAAC TGCCCCGTGA GTGGGATGAA
GTCGGCCTTC ACGGGATAAT GGCCAGCCGT CAGGGTGTCA TGAACAGCCG GGTGGGCAGC
AAAAGTGAAA ACTACGCCGA GCTTTACATC GATTGGTTGT CATGTAGGCA ATTTACCGCC
CCGCAGAAAA AACTGATCGA GCAACGTATC GGGCAGTGGG CATGGCAGCC GCGCATTGTT
CCGGTGATCA TTGATCCGGC TGGCGATGCC GAAGGGCTGG ACATCACCCT GCGCAGCATT
GCCGAGCAGG ATTACGCAGC CGACTCGGTG GTGGTGCTGA CCAATGCCGA GGTTGACGAT
CCGCAGGTGC TGCGCTTCTC GTTGCAGCCG GATTGGGCAC GCCAGTTGAA CGAAGTGCTG
CCGCTGCTGG AGAACGCCGA CTGGGTCTAT CTGCTGCGTG CCGGGGACCG CCTGACCCAG
CCGTCGCTGC TGGTGCTGGC TGAGCGAATC GCGCAACACG AAGGTCTGCT GTGCGTTTAC
AGCGACGAAG GCGCACTGGT CGATGGAAAG TCCAGCGAGC CGATCTTCAA GCCTGATTTC
AATCTGGACC TGATGCGGGC CTATCCGTAT GTCGGTCGCA CGTTGGCGTT CCAGCGCCGC
AATCTGCTGG ACGCAGGCGG CCTGGACCCT GTGCACGGCG AACTGGCGCC GCACGATTTC
ATCTGGCGTC TGGTGGAAGG CGTCGGGCCT CAGGCCATCG AACACATCGC CGAGGTTCTG
GTTGAATCGA CCCTGACCTT CGCGCAATGG CTGTCGCTAC CTCAGGTGAT CAAGCACAAC
GAGTCGGTGG TATCGGCCCA TCTTTCGCGC ATTGGCCGAG AGCATGTTAT CCACCATGAT
CAGTTGCCAC TGTTGAACCG GATCGAATAC CGGCATGCGG CCAGCCCGCT GGTATCGGTG
ATCATCACTA CTCGGGATCA ACTGTCAGCA CTGGAGCGCT GTGTAGAAAG CCTGCTCAGC
AATACCACCT ACCCTCATTA CGAAGTGCTG ATCGTCGACA ATGCCAGCAA GAGCGCCAAT
ACCCGCGCCT GGTTTGCCGC GATGAGCGAG TTGGGCAGCG ACAAGCTGCG CATTTATTCG
CTGACCGAGC CTGGCAGCGA AGCCAGCGCT CAGAACCTCG CCGCCCGGCA TGCCAACGGC
GACTATCTGC TCATGCTCAG CCCACACGCC GTGCTGCATC AGGCGGACTG GCTGCAAGGC
CTGCTCAACC ATGCTCAGCG TCCCGAGGTG GGCATCGTCG GGCCGCGAAT CCTCACCCCG
CAGGGCTCCA TTTTGTATGC CGGGATGGTG ATGGGCATGG ACGGGCTGGC GGGTCGGCCC
TTCATAAGCT ATCCGGCGGG CTCCAGCAGC TATATGCAGC GCCTGCAATT GACGCAGAAC
TGGAGCGCGG TCAGTGGCAA TTGCCTGATG GTGCGCAAGG ACGTATTCGA CGGCGCAGGC
GCAATGGAGG CGGCAACCTT CACTCAAGGA TTGCAGGACC TGGACCTGTG CATGCGGGTC
GGACGTGAAG GCTACCTGAT TGTCGGCACG CCGGATTCGT CACTGGTACT GGCCGAGCCT
GCCGCCGCCG AGCGTTCCGA GGCATCTCGT CAGGCGCTGG ATAATGAGCA GCAATCGTTC
TTCGAAAAAT GGTTACCGAG AATGGCTCGG GACCCCGCCT ATAACCCCAA TCTGAACCTC
ACCGAAGTGC AGGCCTTCGA TCTTGACCCT GGTCTGCAGA TGGGCTGGGA GCCATTCTGC
ACCCGTCATC TGCCTTCGAT TCTGGGCATG CTGGTCAACT CATCGGCAGT GGGCCACTAC
CGTGTCAGTC AACCGATGCT TGAATTGATC GCGGCCGGGC GAGTGGTTGG CCGAATGTCC
TATGAGTCTA TTACGCCCGT TGAGGTCGAG CGCCAGCGTC CGGATGTCAT CGTTTTTCAA
GGACGTTATT CCGAGCCCAA GATCAAGGAT ATTGTTCTGT CCAAGAGTTA CTCCAGTGCC
ATGCGTATTT TTGAGCTGGA TGACTACATC ATCGATGTAC CCGAACGAAA CGAGCACAGG
CGCAGCATGC CCGACAACAT TGCCCAGATG CTGCGCAAAG GCATAGGTCT GTGCGACCGC
GTGGTGGTGT CTACCCAGCC GCTGGCCCAG GCGCTGTCGA GCATGCACAG CGACATTCGC
GTGGTGCCGA ACATGTTGGC GTCGCACTTG TGGAGCAGCC TCAGAAGCCA GCGTCGCACC
TCCGGTAAGC CGCGTATCGG CTGGGGCGGG GGAACCAGTC ACCGCGGCGA CCTGGAGCTT
ATTGTCGATG TGGTACGCGA GCTGGCCGAT GAGGTCGAGT GGGTGTTCTT CGGCATGTGC
CCGGACTTGC TCAAGCCCTA TATTCACGAG TTTCACAGCG CTGTCAGCCT GAACTCCTAT
CCGGCCAAGC TGGCCAGCCT GAACCTCGAT CTGGCCCTTG CGCCGTTGGA GTTCCATATC
TTCAATGACT GCAAGAGCAA TTTGCGTCTG CTGGAGTACG GCGCTTGCGG CTACCCGGTA
ATTTGTTCGG ACACCGAAGC CTACCGCGGC CATTTGCCGG CCACCCGGAT CTACACCAAC
AGCTCCGAAG AATGGCTACA GGCGATTCGC ATGCACTTGT CTGACCCTAA TGCCAGCTAC
CGCATGGGCG ATGAGTTGCG CGAGACGGTG CTGCGCGATT TCATGTTGCG TGGCGAAAAC
CTGCAATATT GGGCCAACGG CTGGTTGCCC GACTGA
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| Protein sequence | MNSAPLVSIV IPAFNPRFFR AALQSALNQV YDNLEIIVCD DCRSDEIKAI FDELAPASSD
RARYVRNPQR LGFQGNLLKC LDESRGHYIK FLCDDDRLFP YFIANQASVL DAYEDVSLVV
GRRQLVDIDD YVLPARLENV GLVPYDAVFK GEDMLAIFER TPRNYLGGFS AALMRRADVL
EYLPSIAQSG QGFVALLDFA LLICLLRRGN LVVLHTIQNV ERLHPGRFSG QPDMIQKATT
EWAWLNEMLK ARSGEQAPAE GWVRFLPLRK ALELPREWDE VGLHGIMASR QGVMNSRVGS
KSENYAELYI DWLSCRQFTA PQKKLIEQRI GQWAWQPRIV PVIIDPAGDA EGLDITLRSI
AEQDYAADSV VVLTNAEVDD PQVLRFSLQP DWARQLNEVL PLLENADWVY LLRAGDRLTQ
PSLLVLAERI AQHEGLLCVY SDEGALVDGK SSEPIFKPDF NLDLMRAYPY VGRTLAFQRR
NLLDAGGLDP VHGELAPHDF IWRLVEGVGP QAIEHIAEVL VESTLTFAQW LSLPQVIKHN
ESVVSAHLSR IGREHVIHHD QLPLLNRIEY RHAASPLVSV IITTRDQLSA LERCVESLLS
NTTYPHYEVL IVDNASKSAN TRAWFAAMSE LGSDKLRIYS LTEPGSEASA QNLAARHANG
DYLLMLSPHA VLHQADWLQG LLNHAQRPEV GIVGPRILTP QGSILYAGMV MGMDGLAGRP
FISYPAGSSS YMQRLQLTQN WSAVSGNCLM VRKDVFDGAG AMEAATFTQG LQDLDLCMRV
GREGYLIVGT PDSSLVLAEP AAAERSEASR QALDNEQQSF FEKWLPRMAR DPAYNPNLNL
TEVQAFDLDP GLQMGWEPFC TRHLPSILGM LVNSSAVGHY RVSQPMLELI AAGRVVGRMS
YESITPVEVE RQRPDVIVFQ GRYSEPKIKD IVLSKSYSSA MRIFELDDYI IDVPERNEHR
RSMPDNIAQM LRKGIGLCDR VVVSTQPLAQ ALSSMHSDIR VVPNMLASHL WSSLRSQRRT
SGKPRIGWGG GTSHRGDLEL IVDVVRELAD EVEWVFFGMC PDLLKPYIHE FHSAVSLNSY
PAKLASLNLD LALAPLEFHI FNDCKSNLRL LEYGACGYPV ICSDTEAYRG HLPATRIYTN
SSEEWLQAIR MHLSDPNASY RMGDELRETV LRDFMLRGEN LQYWANGWLP D
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