Gene PSPTO_1931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1931 
Symbol 
ID1183576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp2113222 
End bp2113695 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content58% 
IMG OID637393309 
Producthypothetical protein 
Protein accessionNP_791754 
Protein GI28869135 
COG category[S] Function unknown 
COG ID[COG3558] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGACA ACGGAAGACC CCCGCTGCCA CCCTTTACGC TGGAGACGGC TATCCAGAAA 
GTCCGCGGCG CCGAAGATGG CTGGAACTCG CGCGATGCGG CGAAAGTTGC GCTGGCCTAT
ACCGAAGACA CGTACTGGCG TAACCGCAGC GAATTCGTCA ACGGTCGCGA TGAGGCGCAG
GCTTTTCTCG AGCGTAAGTG GCGCAAGGAA CTGGATTACC GATTGATCAA GGAGCTCTGG
GCATTCACCG ATAACCGCAT TGCCGTGCGG TATGCCTATG AATGGCACGA TGACTCGGGC
AACTGGTTCC GTTCCTATGG TAATGAAAAC TGGGAGTTCG CGGCGAACGG CCTCATGCAA
CGGCGCTTTG CCTGCATCAA TGATTTGCCG ATCGCCGAGT CCGAGCGCAA ATACCGCTGG
CCACTGGGGC GGCGACCAGA TGATCATCCT GGCTTGAGTG AGCTGGGGCT CTGA
 
Protein sequence
MTDNGRPPLP PFTLETAIQK VRGAEDGWNS RDAAKVALAY TEDTYWRNRS EFVNGRDEAQ 
AFLERKWRKE LDYRLIKELW AFTDNRIAVR YAYEWHDDSG NWFRSYGNEN WEFAANGLMQ
RRFACINDLP IAESERKYRW PLGRRPDDHP GLSELGL