Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1931 |
Symbol | |
ID | 1183576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2113222 |
End bp | 2113695 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637393309 |
Product | hypothetical protein |
Protein accession | NP_791754 |
Protein GI | 28869135 |
COG category | [S] Function unknown |
COG ID | [COG3558] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTGACA ACGGAAGACC CCCGCTGCCA CCCTTTACGC TGGAGACGGC TATCCAGAAA GTCCGCGGCG CCGAAGATGG CTGGAACTCG CGCGATGCGG CGAAAGTTGC GCTGGCCTAT ACCGAAGACA CGTACTGGCG TAACCGCAGC GAATTCGTCA ACGGTCGCGA TGAGGCGCAG GCTTTTCTCG AGCGTAAGTG GCGCAAGGAA CTGGATTACC GATTGATCAA GGAGCTCTGG GCATTCACCG ATAACCGCAT TGCCGTGCGG TATGCCTATG AATGGCACGA TGACTCGGGC AACTGGTTCC GTTCCTATGG TAATGAAAAC TGGGAGTTCG CGGCGAACGG CCTCATGCAA CGGCGCTTTG CCTGCATCAA TGATTTGCCG ATCGCCGAGT CCGAGCGCAA ATACCGCTGG CCACTGGGGC GGCGACCAGA TGATCATCCT GGCTTGAGTG AGCTGGGGCT CTGA
|
Protein sequence | MTDNGRPPLP PFTLETAIQK VRGAEDGWNS RDAAKVALAY TEDTYWRNRS EFVNGRDEAQ AFLERKWRKE LDYRLIKELW AFTDNRIAVR YAYEWHDDSG NWFRSYGNEN WEFAANGLMQ RRFACINDLP IAESERKYRW PLGRRPDDHP GLSELGL
|
| |