| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1915 |
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| Symbol | |
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| ID | 1183560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2094705 |
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| End bp | 2095346 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637393293 |
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| Product | bacterial transferase, hexapeptide repeat protein |
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| Protein accession | NP_791738 |
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| Protein GI | 28869119 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
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| TIGRFAM ID | [TIGR03570] sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00871959 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGTGA ACAGATTGCT CATCGTCGGT GCCGGCGCTT TCGGGCGTGA AGTGCATGCG
TGGCTGCTGG ACTGGGTGAA GCTGAACCCA GGCTGGGTCA TCGCCGGCTT CATCAATGAC
GGCCCCGGTT CCATCGCCAG ATTCGATCAT TACCCGGCGG TTGTTTCGTC GGTGGAGGGC
TACGAGCCGG GGCCTGAGGA TTACCTCGTC TGCGCCATCG CCAAGCCGGC CGACAAGCGT
CTGGTCGTGG AAAAACTACT CGGCAAAGGA GCCCGGTTTT TCACGCTTAT CCATCCCTCG
GTCATCATGG GCGAGAACGT TGTTATCGGG CAGGGTGCGG TTATCTGTCC TTCAACCGTT
CTTTCGGTGG ACCTGCGCAT TGGCGCATTC GTGACCCTCA ACATCGGCTG CCTGGTGGGG
CACGATGCAG ACATCGGTGA CTTCTCGACA TTGAGCGGGC ACTGCGATAT TACCGGCGGC
GTGGTGCTGG AGGAGGAAGT GTTCATGGGC ACCCATGCCA GCGTCCTGCC GAACGTCAAA
GTCGGCAAAC AGGCTGTAGT CGGAGCCGGC AGCGTTGCGA TACGCAATGT GGCCGCAGGC
ATTACAGTAT TCGGTGTACC TGCCAAACGC ATATCGGGGT AA
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| Protein sequence | MNVNRLLIVG AGAFGREVHA WLLDWVKLNP GWVIAGFIND GPGSIARFDH YPAVVSSVEG
YEPGPEDYLV CAIAKPADKR LVVEKLLGKG ARFFTLIHPS VIMGENVVIG QGAVICPSTV
LSVDLRIGAF VTLNIGCLVG HDADIGDFST LSGHCDITGG VVLEEEVFMG THASVLPNVK
VGKQAVVGAG SVAIRNVAAG ITVFGVPAKR ISG
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